Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2365 |
Symbol | |
ID | 3367880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2742650 |
End bp | 2743870 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652711 |
Product | radical SAM family protein |
Protein accession | YP_235442 |
Protein GI | 66045601 |
COG category | [R] General function prediction only |
COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0229751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.414721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTTA TCGACAAGCT CAGCATTCTG GCAGACGCCG CCAAGTACGA TGCGTCGTGC GCGAGTAGTG GAGCACCCAA GCGCAGCTCG CAGGACAAGT CCGGGCTCGG TTCCACCAAT GGCATGGGCA TCTGCCACAG CTATACGCCG GACGGGCGTT GCGTGTCGCT GCTGAAAATC CTCCTGACCA ACTTCTGTCT TTACGACTGC CAGTACTGCG TCAACCGTCG CTCCAGCGAT GTGCCCCGTG CGCGCTTCAC TCCCGAAGAA GTGGTCACCC TGACCCTGGA CTTCTATCGC CGCAATTGCG TGAGCGGGCT GTTTTTGAGT TCCGGGATCA TTCGCTCCGC GGACTACACC ATGGAGCAAC TGGTCGAAGT TGCCCGGCTG TTGCGCGAGG TGCATGAGTT TCGCGGCTAC ATCCACCTCA AGACCATCCC TGACGCCGAT CCGGCGCTGA TCGAAAAGGC CGGCCGCTAC GCCGACCGTC TCAGCGTCAA CATCGAGCTG CCAACTGACC TGAGCCTGCA GACCCTGGCC CCGGAAAAAG ACGTCGCGTC GATCAAGCAG GCCATGCAGA CGATTTACAC CGGTGAGCAG ACGGTGCGCA ACGAGCCTCG CTCGCCGCGC TTTGCGCCTG CCGGGCAGAG CACGCAGATG ATTGTCGGTG CCGATGCCAC CGACGACAGC ACCATCCTGC ACAGCGCGCA GTCGCTGTAC AGCAACTTCA AGCTGCGCCG GGTCTACTAT TCTGCGTTCA GCCCGATACC CAACAGCCCC AACAGCGTTC CCCTGGCGGC ACCGCCTCTG ATGCGCGAGC ATCGCCTGTA TCAGGCTGAC TTTCTGCTGC GCGGCTATGG TTTTACCGCG GGTGAACTGC TCGACGGCCC CGGTGATCTG GCGCTGGACA TCGACCCTAA ACTGGCGTGG GCGCTGGGCA ACCGCCAGGT TTTCCCGCTG GACCTGAACC AGGCGGACCC GGCGCTGATC GCCAGGGTGC CGGGTATTGG CATCCGCACC ACGCAGCGGC TGGTCGAGCT GCGCAGACAG CGACGCATCC GCTACGAAGA CCTCACCCGC ATGCGCTGCA TACTGGCCAA GGCCAAGCCG TTCATCATTA CCAGTGATTA CCACCCGCCG CACGCGGAAA CCACCAGCGA GTTCCTGCAT CACCAGTTGC GCGACCGGCC TCAGCCTCAG CAAATGGGCC TGTGGGGATG A
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Protein sequence | MQLIDKLSIL ADAAKYDASC ASSGAPKRSS QDKSGLGSTN GMGICHSYTP DGRCVSLLKI LLTNFCLYDC QYCVNRRSSD VPRARFTPEE VVTLTLDFYR RNCVSGLFLS SGIIRSADYT MEQLVEVARL LREVHEFRGY IHLKTIPDAD PALIEKAGRY ADRLSVNIEL PTDLSLQTLA PEKDVASIKQ AMQTIYTGEQ TVRNEPRSPR FAPAGQSTQM IVGADATDDS TILHSAQSLY SNFKLRRVYY SAFSPIPNSP NSVPLAAPPL MREHRLYQAD FLLRGYGFTA GELLDGPGDL ALDIDPKLAW ALGNRQVFPL DLNQADPALI ARVPGIGIRT TQRLVELRRQ RRIRYEDLTR MRCILAKAKP FIITSDYHPP HAETTSEFLH HQLRDRPQPQ QMGLWG
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