Gene Psyr_2335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2335 
Symbol 
ID3367850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2712467 
End bp2713495 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content63% 
IMG OID637652682 
ProductABC transporter 
Protein accessionYP_235413 
Protein GI66045572 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.321614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.595854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTC TGCAGCTCGA AGGTCTCTCC AAACGCTACG GCTCCATTGA CGCGGTGGTT 
GCCACCAACC TGGCCGTCGA CAAGGGCGAA TTCGTTTCAC TGCTCGGCCC TTCCGGCTGC
GGCAAAACCA CCACCCTGCA AATGATCGCC GGTTTCGTTG AAGTCAGTGA CGGGCGCATT
GTGCTCGACG GGCGCGACAT CACCCACGCC AAACCCAGCA GCCGAGGCCT CGGCGTAGTG
TTTCAAAGCT ATGCGCTGTT TCCGCACATG ACCGTGGCCG ACAACGTTGC ATTTGGCCTG
CGGATGCGCA AGGTGGCTGC CGCCGAGTTG CACCCGCGTG TCAAACGGGT GCTGGAGCTG
GTGCGCCTCG GTCAGCATGC CGAGCGCTAC CCGCGCGAGC TGTCCGGTGG TCAGCGCCAG
CGGGTCGCAT TGGCCCGCGC ACTGGTAATC GAGCCGCCAG TGCTGCTGCT CGACGAGCCG
CTGTCCAACC TGGACGCCAA CCTGCGCGAA GAGATGCAGT TCGAGATCCG CCGCATTCAG
AACGAAGTCG GCATTACCAC GCTGATGGTC ACCCATGATC AGGCCGAAGC CCTGTCGATC
AGCGATCGGG TGGTGGTGAT GCAGGCCGGT CGTATCACCC AGATCGACGA GCCATACAAG
CTCTACGAAC ACCCGCGCAC ACGCTTCATC TCGGGTTTTG TCGGCAAGGC CAACATGTTG
CAGGGTGATC TGGACAGCAG CGGCATTCCG CAGATTCGTC AGGTGCCCGG CGATGGCAGC
CTGACCCTCA GCCTGCGTCC CGAGAAGATC GATCTGGTGG CGCCTGGCTG CGGACGGCTG
TCCGGGCGCA TCGTCACGCG TTATTTTCTC GGCAGCCAGT GGCTGTATCG GATTGAGACC
GGCATTGGCG AAGTGACGGT AGTACGTCGC AACGACGGCC AGGCGCCGCT GGAACAAGGC
GCGGCGGTCG ACATGGACTG GCCCGACGAG TTGCTGCGCG TGCTGGATGC CGACGAGGTG
CGCGCATGA
 
Protein sequence
MAFLQLEGLS KRYGSIDAVV ATNLAVDKGE FVSLLGPSGC GKTTTLQMIA GFVEVSDGRI 
VLDGRDITHA KPSSRGLGVV FQSYALFPHM TVADNVAFGL RMRKVAAAEL HPRVKRVLEL
VRLGQHAERY PRELSGGQRQ RVALARALVI EPPVLLLDEP LSNLDANLRE EMQFEIRRIQ
NEVGITTLMV THDQAEALSI SDRVVVMQAG RITQIDEPYK LYEHPRTRFI SGFVGKANML
QGDLDSSGIP QIRQVPGDGS LTLSLRPEKI DLVAPGCGRL SGRIVTRYFL GSQWLYRIET
GIGEVTVVRR NDGQAPLEQG AAVDMDWPDE LLRVLDADEV RA