Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2188 |
Symbol | |
ID | 3367703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2542907 |
End bp | 2544529 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637652538 |
Product | histidine kinase |
Protein accession | YP_235269 |
Protein GI | 66045428 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.035953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCA AACTCAGTAT CTCGCAAAAG CTGTACTTCA GCTTTGCCGC GATCATCCTA TTTATCGCCG TTCTGGTCGC GAGTGCTTAC AGAGGCTTTG AGCAGGTCGA AGAGGCAACT AACAGCAATG TCCATACGTA TCAGGTACTG AGCGAAGCAC AACTAGCCCT TGAACAGCTG ATCAATATCG AAACCGGGAT GCGCGGCTTT GTCATTGCCT CAAAGGATGC GTTTCTGGAG CCATTGGTGG CGGGGGAGAA GCGCTTCATC GAAGAACTCG ATTCGCTCAA GCGTCTGACA GCTGACAATG CGGAACAGCA GCGCCGCCTG GCTGCTCTGG GTGACACTCA GAAACGCTGG CTTGATGAAG ATGTCAATCC GATCATCGCC CTGCGCCGCG ATCTGACTGC ACGCAATATG CCTGATGATC AACTGGATGC ACGCATCACC TCGGGTGCCG ACAAGGCCAA GATGGACAGC ATGCGCGCTT TACTTGCCGA GATCAGCGGT GCCGAGCAGA AGTTGCTGGT TCAGCGTAGC CAGGACATGA CGGACGCCAA GCATTTGGCG ATCCTGATCC TGATGTGCGG CGGCCTGGCC GCGGCTGTTC TCGCGATGAT CCTTGCCGCT GTATTGGGGC GCAGTACCAC GGCGCGTTTG CAACTGGCCA TTGATGCCGC AACGGCAATT GCCAATGGCA AGCTGGACAC CGTGATCGAT ACCAGCAGCC ACGACGAACT GCCGAAAGCC TTTGATCGTA TGCAGAATCG CCTGCGCGAG ATGATTCAAC AGATCAGCCA GGCTGCCAAT CAGCTGGTCG TTGCCGTACA ACAGATTTCC GGTGCGTCCG AGCAACTGTC CGGTGCTATC CAGGAACAGT CGACGTCCGC CTCGGCGATG GCGGCCACGA TCGAAGAGCT GACCGTCAGC ATCCATCACG TTTCCGAAAA CGCCGACGAG GCGCATGAAC TCGCCAGTCG TTCAGGGCAA CAGTCGAAGG ACGGTGCGCA GGTCATCGAA AATACCCTGT CCAGCATGAA TGGCATCGCC CGGACCGTGC AGCTTTCCTC TACTCAGGTC GCAGGCCTGG GTCAGCACTC CGAGCACATT TCATCGATCG TCAGCGTGAT TCAGGGCATT GCCGACCAGA CCAACCTGCT GGCCCTCAAC GCTGCCATCG AAGCTGCTCG TGCCGGTGAA CAAGGCCGTG GCTTCGCAGT GGTTGCCGAC GAAGTGCGCC TGCTGGCGCA GAACACCGGC AAGTCCACCA AGGAAATCGC CGGGATGATC GAGAAAATTC AGGCGGGTGT ACGGGAAACC GTCGAGAGCA TGCGTAGCGG CGTTCAGGAA GTGAACGAAG GCGTCGAAAT GGCGGGCACC GCCGGTCAAG CGATCATCGA GATTCGCGAC AGTTCGGGCA AGGTTCTGCA AGTGGTCGAC CAGATATCCT TCGCACTGCG TGAGCAAACC GCAGCGAGCC AGGATGTCGC ACGTAACGTC GAGCGCTCCG CGCAAATGGC TGAACAGAAC AACATTTCGG TTCAGGAATT GCTCAAGACC AGCGGCGGCC TGAAGAACCT CGCTACCAGC CTGCAGACGG AAGTGGGAAA GTTTCGGCTT TAA
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Protein sequence | MFSKLSISQK LYFSFAAIIL FIAVLVASAY RGFEQVEEAT NSNVHTYQVL SEAQLALEQL INIETGMRGF VIASKDAFLE PLVAGEKRFI EELDSLKRLT ADNAEQQRRL AALGDTQKRW LDEDVNPIIA LRRDLTARNM PDDQLDARIT SGADKAKMDS MRALLAEISG AEQKLLVQRS QDMTDAKHLA ILILMCGGLA AAVLAMILAA VLGRSTTARL QLAIDAATAI ANGKLDTVID TSSHDELPKA FDRMQNRLRE MIQQISQAAN QLVVAVQQIS GASEQLSGAI QEQSTSASAM AATIEELTVS IHHVSENADE AHELASRSGQ QSKDGAQVIE NTLSSMNGIA RTVQLSSTQV AGLGQHSEHI SSIVSVIQGI ADQTNLLALN AAIEAARAGE QGRGFAVVAD EVRLLAQNTG KSTKEIAGMI EKIQAGVRET VESMRSGVQE VNEGVEMAGT AGQAIIEIRD SSGKVLQVVD QISFALREQT AASQDVARNV ERSAQMAEQN NISVQELLKT SGGLKNLATS LQTEVGKFRL
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