Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2170 |
Symbol | |
ID | 3367685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2523343 |
End bp | 2524257 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637652520 |
Product | extracellular solute-binding protein |
Protein accession | YP_235251 |
Protein GI | 66045410 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.541811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACCT TCTCTGCAAT CCTGGGCGTT ACCCTGACTG TGGCCTTAAG TAGTACTGCC CTCATGGCTG CCGAACCCAC CGGCACGCTT AAGAAAATCA AGACCTCGGG GACCATCACC CTGGGTCACC GAGACTCTTC CATTCCCTTC TCTTATATGG CCGACGGATC CGGTCAGCCG ATGGGCTACT CCCATGACAT TCAATTAAAG ATTGTCGAGG CTATCAAGCA AGAACTCGGT ATGCCCAAGC TGAACGTACG GTACAACCTG GTGACATCAC AGACGCGTAT CCCACTGGTG CAAAACGGCA CTGTGGACCT GGAGTGCGGC TCCACAACCA ATACCGCCGA GAGAGCTCGG CAGGTCGACT TCTCGGTCGG CATTTTTGAA GCCAGCACCC GTCTGTTGGT CAGGAAGGAT TCGGTTTACA AGGACTTTCA AGATCTCAAC GGCAAGAACG TAGTGACTAC TGCTGGCAGC ACTGCCGAGC GGATGCTCAA GGTCATGAAT GCCGAGAAAA AGATGAACAT GAACGTAATC TCTGCCAAAG ACATTGGCGA GTCTTACCAA ATGCTCGAGT CCGGCCGCGC CATTGCGTTT ATGCAGGACG ACGCATTGCT AGCGGGCGAA ATGGCAAAGG CAAAGAAACC GGAAGATTGG GTAGTGACTG GCACCCCGCA ATCCAACGAA ATCTATGGTT GCACAATGCG TCGGGGTGAT CCGGATCTCA AAAAAGTCGT GGATGACTCG ATTAAGTCAC TTTTTGTCTC AGGTGAAATC AACGCCATCT ACGATAAATG GTTTACTCAG CCCATCCCTC CCAAAGGCTT GAATCTCAAA TTCCCCATGA GCGCAGAGCT CAAAACAATC ATCGCCCAAC CCAACGACCA ACCGGCACCG GAAAAGGCTC TTTAA
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Protein sequence | MRTFSAILGV TLTVALSSTA LMAAEPTGTL KKIKTSGTIT LGHRDSSIPF SYMADGSGQP MGYSHDIQLK IVEAIKQELG MPKLNVRYNL VTSQTRIPLV QNGTVDLECG STTNTAERAR QVDFSVGIFE ASTRLLVRKD SVYKDFQDLN GKNVVTTAGS TAERMLKVMN AEKKMNMNVI SAKDIGESYQ MLESGRAIAF MQDDALLAGE MAKAKKPEDW VVTGTPQSNE IYGCTMRRGD PDLKKVVDDS IKSLFVSGEI NAIYDKWFTQ PIPPKGLNLK FPMSAELKTI IAQPNDQPAP EKAL
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