Gene Psyr_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2170 
Symbol 
ID3367685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2523343 
End bp2524257 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content52% 
IMG OID637652520 
Productextracellular solute-binding protein 
Protein accessionYP_235251 
Protein GI66045410 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.541811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCT TCTCTGCAAT CCTGGGCGTT ACCCTGACTG TGGCCTTAAG TAGTACTGCC 
CTCATGGCTG CCGAACCCAC CGGCACGCTT AAGAAAATCA AGACCTCGGG GACCATCACC
CTGGGTCACC GAGACTCTTC CATTCCCTTC TCTTATATGG CCGACGGATC CGGTCAGCCG
ATGGGCTACT CCCATGACAT TCAATTAAAG ATTGTCGAGG CTATCAAGCA AGAACTCGGT
ATGCCCAAGC TGAACGTACG GTACAACCTG GTGACATCAC AGACGCGTAT CCCACTGGTG
CAAAACGGCA CTGTGGACCT GGAGTGCGGC TCCACAACCA ATACCGCCGA GAGAGCTCGG
CAGGTCGACT TCTCGGTCGG CATTTTTGAA GCCAGCACCC GTCTGTTGGT CAGGAAGGAT
TCGGTTTACA AGGACTTTCA AGATCTCAAC GGCAAGAACG TAGTGACTAC TGCTGGCAGC
ACTGCCGAGC GGATGCTCAA GGTCATGAAT GCCGAGAAAA AGATGAACAT GAACGTAATC
TCTGCCAAAG ACATTGGCGA GTCTTACCAA ATGCTCGAGT CCGGCCGCGC CATTGCGTTT
ATGCAGGACG ACGCATTGCT AGCGGGCGAA ATGGCAAAGG CAAAGAAACC GGAAGATTGG
GTAGTGACTG GCACCCCGCA ATCCAACGAA ATCTATGGTT GCACAATGCG TCGGGGTGAT
CCGGATCTCA AAAAAGTCGT GGATGACTCG ATTAAGTCAC TTTTTGTCTC AGGTGAAATC
AACGCCATCT ACGATAAATG GTTTACTCAG CCCATCCCTC CCAAAGGCTT GAATCTCAAA
TTCCCCATGA GCGCAGAGCT CAAAACAATC ATCGCCCAAC CCAACGACCA ACCGGCACCG
GAAAAGGCTC TTTAA
 
Protein sequence
MRTFSAILGV TLTVALSSTA LMAAEPTGTL KKIKTSGTIT LGHRDSSIPF SYMADGSGQP 
MGYSHDIQLK IVEAIKQELG MPKLNVRYNL VTSQTRIPLV QNGTVDLECG STTNTAERAR
QVDFSVGIFE ASTRLLVRKD SVYKDFQDLN GKNVVTTAGS TAERMLKVMN AEKKMNMNVI
SAKDIGESYQ MLESGRAIAF MQDDALLAGE MAKAKKPEDW VVTGTPQSNE IYGCTMRRGD
PDLKKVVDDS IKSLFVSGEI NAIYDKWFTQ PIPPKGLNLK FPMSAELKTI IAQPNDQPAP
EKAL