Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2162 |
Symbol | thrS |
ID | 3367676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2515735 |
End bp | 2517657 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637652511 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_235243 |
Protein GI | 66045402 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.749908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACTA TTACTCTTCC CGACGGCAGT CAACGTTCAT TCGATCAGGC GGTTTCCGTA GCCGATGTCG CGCTTTCAAT CGGTGCCGGT CTGGCCAAGG CCACCGTCGC CGGCAAGGTC GACGGCAAGC TCGTCGACGC CTGCGACCTG ATCGAAAACG ATGCCAGCCT GCAGATCATC ACCCCCAAGG ATCAGGAAGG ACTGGAAATC ATCCGTCACT CCTGCGCGCA CCTGGTAGGG CACGCGGTCA AGCAGTTGTA TCCGACTGCA AAAATGGTCA TCGGCCCGGT GATCGACGAC GGCTTCTATT ACGATATCGC CTACGAGCGC CCGTTCACGC CTGACGATAT GGCGGCGATC GAACAGCGCA TGCAGCAGTT GATCGAAAAA GATTACGACG TCATCAAGAA AGTCACGCCG CGCGCTGAAG TGATCGAGGT GTTCACCGCC CGTCACGAAG ATTACAAGCT GCGTCTGGTC GAAGACATGC CGAGCGAGCA GGCCATGGGC CTGTATTACC ACGAAGAATA CGTCGACATG TGCCGCGGTC CACACGTGCC GAACACTCGC TTCCTGAAGT CATTCAAGTT GACCAAGCTG TCCGGTGCCT ACTGGCGTGG CGACGCCAAG AACGAGCAAT TGCAGCGCGT CTACGGCACT GCCTGGGCCG ACAAGAAACA ACTGGCAGCC TACATCCAGC GCATCGAAGA AGCCGAAAAA CGCGACCATC GCAAGATCGG CAAGCGTCTC GGCCTGTTCC ATACCCAGGA AGAAGCGCCG GGCATGGTTT TCTGGCACCC GCAGGGCTGG ACCCTGTATC AGGTGCTTGA GCAGTACATG CGTAAAGTGC AGCGTGAGAA TGGCTACCTC GAGATCAAGA CCCCGCAAGT GGTCGATCGC TCGCTCTGGG AAAAATCCGG GCACTGGGCC AACTACGCCG ACAACATGTT CACCACCGAG TCCGAAAGCC GCGACTACGC GATCAAGCCG ATGAACTGCC CTTGCCACGT GCAGGTGTTC AATCAGGGCC TGAAAAGCTA CCGCGAGCTG CCGATGCGTC TGGCCGAGTT CGGTGCCTGT CACCGTAACG AGCCGTCGGG TGCCTTGCAC GGCATCATGC GCGTGCGTGG CTTCACCCAG GACGATGCGC ACATCTTCTG TACCGAAGAC CAGATGCAGG CCGAGTCCGC CGCGTTCATC AAGCTGACGC TGGATGTCTA CGCCGATTTC GGTTTCAAGG ATATCGAACT CAAATTGTCC ACTCGCCCTG AAAAGCGTGT AGGCTCCGAC GAGCTTTGGG ACCGTGCCGA ATCGGCGCTG GCTTCCGCAC TCGACAGCGC TGGTCTGCCT TACGACCTGC AGCCGGGCGA GGGCGCGTTC TACGGTCCGA AAATCGAGTT CTCCCTCAAG GATTGTCTCG GTCGGGTATG GCAGTGCGGC ACCTTGCAGC TGGACTTCAA TCTGCCGATC CGCTTGAGTG CCGAGTACGT TTCGGAAGAC AACAGTCGCA AGAATCCGGT CATGTTGCAC CGCGCAATCC TTGGGTCTTT CGAGCGTTTC ATCGGAATTC TGATCGAGCA TTACGAAGGG GCGTTTCCGG CCTGGCTGGC GCCTACCCAG GCAGTGATCA TGAATATCAC TGACAAACAG GCCGATTTTG CCCTCGAAGT GGAAAAAACT CTGGCCGAAA GCGGGTTTCG TGCCAAGTCC GACTTGAGAA ATGAAAAGAT CGGCTTTAAA ATCCGTGAGC ATACTTTGCT CAAGGTTCCT TATCTCCTCG TGATTGGAGA TCGGGAGGTT GAAATGCAAA CTGTCGCTGT GCGTACACGT GAAGGCGCTG ACCTTGGCTC GATGCCGGTC GCCCAATTCG CTGAATTCCT CGCACAAGCG GTTTCCCGGC GTGGTCGCCA AGATACGGAG TAA
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Protein sequence | MPTITLPDGS QRSFDQAVSV ADVALSIGAG LAKATVAGKV DGKLVDACDL IENDASLQII TPKDQEGLEI IRHSCAHLVG HAVKQLYPTA KMVIGPVIDD GFYYDIAYER PFTPDDMAAI EQRMQQLIEK DYDVIKKVTP RAEVIEVFTA RHEDYKLRLV EDMPSEQAMG LYYHEEYVDM CRGPHVPNTR FLKSFKLTKL SGAYWRGDAK NEQLQRVYGT AWADKKQLAA YIQRIEEAEK RDHRKIGKRL GLFHTQEEAP GMVFWHPQGW TLYQVLEQYM RKVQRENGYL EIKTPQVVDR SLWEKSGHWA NYADNMFTTE SESRDYAIKP MNCPCHVQVF NQGLKSYREL PMRLAEFGAC HRNEPSGALH GIMRVRGFTQ DDAHIFCTED QMQAESAAFI KLTLDVYADF GFKDIELKLS TRPEKRVGSD ELWDRAESAL ASALDSAGLP YDLQPGEGAF YGPKIEFSLK DCLGRVWQCG TLQLDFNLPI RLSAEYVSED NSRKNPVMLH RAILGSFERF IGILIEHYEG AFPAWLAPTQ AVIMNITDKQ ADFALEVEKT LAESGFRAKS DLRNEKIGFK IREHTLLKVP YLLVIGDREV EMQTVAVRTR EGADLGSMPV AQFAEFLAQA VSRRGRQDTE
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