| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2132 |
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| Symbol | aroE |
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| ID | 3367646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2492164 |
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| End bp | 2493018 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637652481 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_235213 |
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| Protein GI | 66045372 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.123171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCATG CTGAAAAACC CTCCATCCTC GCCGGCCTGA TCGGCTCGGG CATCCAGGCC
TCGCGGACAC CTGCCATGCA CGAGCATGAA GGCGATGCAC AAGGCATGCG CTATCTGTAT
CGGCTGATCG ATATCGACGC CCTGCAACTG GACATCCATG CCCTGCCCCA ACTGCTGGAA
GGTGCCAGGC AGTGCGGCTT CACCGGCCTG AATATCACCT TCCCCTGCAA GCAGGCGGTC
ATCCCGTTAC TGGACGAGCT GTCCGACGAA GCGCGCGGTA TCGGCGCGGT GAATACGGTG
GTGTTCAAGG ACGGCAAGCG TATCGGTCAC AACACCGACT GCCTGGGCTT TGCCGAAGGC
TTTCAGCGCG GCCTGGACAA GGCCCCACGC CAACAGGTAG TGCAGATGGG TGCAGGTGGC
GCGGGCGCTG CCGTGGCTCA TGCGCTGCTG AGCGCAGGCG TCGAGCGCCT CAGCGTGTTT
GAGGTCGAGC CGCAACGCGC CCAGGGGCTG GTGGACAACC TCAACCAGCA CTTCGGTGCC
GGACGCGCGC AGGTGGGTAC CGACCTGCCT GCAGCGATGG CCGAAGCCGA CGGGCTGGTC
AATACCACGC CGGTCGGCAT GACCAAACTG CCGGGTACGC CGTTGCCGGT CGAGTTGCTG
CGGCCTGAAC TGTGGGTGGC GGAAATCATT TACTTTCCGC TGGAAACCGA ACTGCTCAGG
CATGCCCGCG CACTGGGCTG CCGCACCCTG GATGGCAGCA CCATGGCGGT GTTTCAGGCG
GTCAAGGCCT TCGAACTGTT CAGTGGCCAG TCCGCCGATG CAGAGCGGAT GATGGCGCAC
TTCCACACGT TGTAA
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| Protein sequence | MTHAEKPSIL AGLIGSGIQA SRTPAMHEHE GDAQGMRYLY RLIDIDALQL DIHALPQLLE
GARQCGFTGL NITFPCKQAV IPLLDELSDE ARGIGAVNTV VFKDGKRIGH NTDCLGFAEG
FQRGLDKAPR QQVVQMGAGG AGAAVAHALL SAGVERLSVF EVEPQRAQGL VDNLNQHFGA
GRAQVGTDLP AAMAEADGLV NTTPVGMTKL PGTPLPVELL RPELWVAEII YFPLETELLR
HARALGCRTL DGSTMAVFQA VKAFELFSGQ SADAERMMAH FHTL
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