Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2128 |
Symbol | |
ID | 3367642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2486066 |
End bp | 2486953 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652477 |
Product | hypothetical protein |
Protein accession | YP_235209 |
Protein GI | 66045368 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00862531 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.346233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTG CCAGCACGCC GTCGTCCGGC GTCAATCAAC CTCTCAAAGG TATAGGCTTC ATTCTTCTGG CGACCTTCCT GTTTGCCAGT CACGACACCC TGTCCAAGTA CCTGTCCGGC TTCTATCCGA TCATTCTGGT GGTTTGGGCG CGCTATCTGG TGCACACGCT GTTGATGGCC TGCATTTTCA TGCCTTCAGC GGGGTTGCGA GTGTTGCGCA CCAAAAGGCC CGGCCTGCAG GTCTTGCGCG CACTGGCGCT GCTGGGCACC AGTCTGCTGT TTACCAGCAG CCTGATGTTC ATCCCGCAGG CAGAGGCGAC CGCGGTCAAC TTTCTTGCGC CGTTGCTGGT CACCGCGTTA TCGGTGCCGC TGCTGCACGA GCGTGTAACG CGCGGCCAGT GGATTGCGGT GGTGGTAGGG TTTGTCGGGG TGATGATCAT CATTCATCCG GGCGGCGAGC TGTTTACCCC GGCAATTCTG CTGCCGCTGT CGTCAGCCTT GTGTTTTGCG CTGTATCAAC TCCTGACGCG GCTGGTCAGC CCGTTCGACA GCCCGACCAC CAGCAACTTT TTCGCCGGGC TGTTCAATAC CCTGTTGATG AGTGCGCTGG TGCCGTTCTT CTGGGAAGTG CCAGCGCTCA AGCACCTGCC GTTTCTGCTG GCGCTCGGCG CGTGTGGCAT GTCGGCGCAT TTGCTGCTGA CCCAGGCCTT CCGCTTCGCC GCCCCGGCCA TGCTTGCGCC GTTCAGTTAT TGCCAGATCG TGTTTGCCGG ACTGCTGGGC TACCTGGTCT TCGACCACAC CCCGTCCCCG ACCGCGCAGG CCGGCATCGC CATCATCTGC CTCAGCGGTC TGGCAGCAGC GTGGCAACAG CGACGTAAGG GTGGGTAA
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Protein sequence | MSTASTPSSG VNQPLKGIGF ILLATFLFAS HDTLSKYLSG FYPIILVVWA RYLVHTLLMA CIFMPSAGLR VLRTKRPGLQ VLRALALLGT SLLFTSSLMF IPQAEATAVN FLAPLLVTAL SVPLLHERVT RGQWIAVVVG FVGVMIIIHP GGELFTPAIL LPLSSALCFA LYQLLTRLVS PFDSPTTSNF FAGLFNTLLM SALVPFFWEV PALKHLPFLL ALGACGMSAH LLLTQAFRFA APAMLAPFSY CQIVFAGLLG YLVFDHTPSP TAQAGIAIIC LSGLAAAWQQ RRKGG
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