| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2113 |
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| Symbol | |
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| ID | 3367627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2469400 |
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| End bp | 2473020 |
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| Gene Length | 3621 bp |
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| Protein Length | 1206 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652462 |
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| Product | PAS |
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| Protein accession | YP_235194 |
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| Protein GI | 66045353 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.819255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.387177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGC GCTTCAGACA ATTATTAATA CTGGCCACAA GCCTGTGCAT AGGCTGGGGT
GCTGAGGCCG GTGTTCATGC GGCCGATCAC TATACCCTGC TCGGTCGCTC GAGTCCGGCG
CACATGGACG TGAAACTGGA CAATAACCAG TGGCAGTGGG TGCGCGGGCA ACGCGAACTG
ATTCTCGGCA CCTCCAACCC TGATTACCCA CCCTTCGATA TCACGATGTC GGGTAACGAT
TACGAAGGCA TCACTGCCGA TTACGCAGGG ATCATCTCGG ATGCGCTGGA CCTGCCGATC
AGGGTTCAGC GTTTCGAAAC CCGTGATGCT GCAATCAAGG CCCTCGGCGC AGGCCAGATC
GATCTGCTGG GCACCGCAAA CGGTTTTGAA GCAGTCGATC GCACCATCAG GCTTTCACAG
CCCTACTCGG TGGACCAGCC CGTCCTGGTC ACCCGGGTCG GAGACAACCG CCCCCTGAAC
GAGGGCCTGA AAGGCATGCG GCTGAGCATG GTCTATCACT ACCTGCCGCC TGCCGAGGTC
GAAGCGTCCT ATCCCGGCGC GACACTGAAG ACCTATCCCT CTTTTCAGAA CGCCATCAAT
GCAGTCGCCT TCAATCAGGC GGATGTGTTC CTGGGCGATA CGATTTCCAC CCAATACATC
ATCAATAAGG GGTATCTGAA CAACGTGCAG ATGTCGAATT TCGGCAAGCA CGAGCCCAAC
GGCTTCAGCT TCGCGGTCAG CAGTGAAAAC CCGCAACTGC TGGGCATCAT CAATCAGACG
CTGAAGGCGA TCCCGGTTGA TGAACGCGTC AATATCTCCA GACGCTGGAG CACGGGCAGC
GACTTGATGC TCACCGACCA GAAGCTGCAA CTGACGCAAC GCGAGGAGCG CTGGATCGCT
CAGCACCCTA CCGTGCGCGT AGTCGTCAAC GAAGCGTATG CACCGCTGAC ATTCTTCGAT
GCCAAGGGCA ACTTTCGCGG CATCACCGCA GACTTGCTCG AACTGGTACG TCTGCGTACC
GGGCTCAGGT TCGACGTCAA ACGCTCGCCC AGCCTGACCG ACATGTTGAA TCAGGTCAGC
GAAGGCCAGG CAGACATGAT CGGTGCGCTG GTGTCCAGTG ATGCGCGCGA GGACCGATTG
AGCTTCACCC GTCCCTACAT CGACAATTCG TTCGTGCTGG TCACCCGCAA GGAACCGGGC
GCCCCCAGCT ATCTGGAGCA GATGGACGGC AAGCGTCTGG CAATCACCCA GGGTAGCCCG
GTGCTCGACT GGCTAAGCCG CAAATACCCC AGGGTGGTGC CGCTGGAAAT CGACAACCCG
TTCCAGGCGC TGGACATGTT GTCACTGGGC AGAGCGGAAG GTGCGGTCAT CTCGCTGCTC
AGCGCAGACT ATTTCCTGTC GTCCGGGATC TTCGAGGAGC GTTTGCAGAT GACCGCCACC
GTTGGCGAGG ATCCGGCGCT GATTTCCATG GCGACCTCAC GCAACGCCAT CGAGCTGAGC
TCGATTCTCG ACAAGGCGCT GGCGAGCATC GCGCCGCAGG ATCTGGCAGC GATCAACAAC
CGCTGGCGCG TCTATACCCC TTCACGCGCC AACTGGCACG ACTATGAACG GCTGATCTAT
CAGATTGTGG TGGGTGCAGG CCTGTTGCTG CTGGGCCTGC TGGCCTGGAA TGCGTGGATG
CGGCGGCAGA TACGTCAGCG CGAAGCTGCG GAGCGGGCGC TGGGCGATCA GTTCGAATTC
ATGCGCGCCC TGGTCGAGGG TACGCCGCAT CCGATCTATG TTCGGGATCG CGAAGGTATG
CTGCGCATGT GCAATGACAG CTACCTCAGG GTGTTCTCCG CGCAACGGGA AGACATCATC
GGCAAGAGCG CTACCGAAGG GGTACTGGGC AATGCCTTCG AAGCCCGGGA ATACGCTGCC
GACTATCAGC GGGTCATGGC CAGCAATACC GCGCTGATCC TCGACCGCCC TCTGCGCATT
GGCGATCGAC AGTTGACCAT CTACCACTGG ATCCTGCCAT TTCGCGATTC TCTGGGCGAA
GTACAGGGCA TCATCGGTGG CTGGATCGAC ATCAGCGAGC GTCGCCAGCT CATCGAAGAC
TTGCAGGCTG CCAAGGAACA GGCCGACGCC GCCAGCCGGG CCAAGAGTAC CTTCCTGGCC
ACCATGAGCC ATGAAATCCG CACGCCCATG AATGCGGTGA TCGGCATGCT GGAACTGGCG
CTCAAACGTG CCGATCATGG CGAACTGGAT CGCTCCGCCA TCGAAGTCGC CTACAGTTCG
GCCAATGACC TGCTGGACCT GATCGGCGAC ATCCTCGACA TCGCCCGCAT CGAATCCGGG
CGGCTGTCAC TCAACCCCGA GCGTGCGAAT CTGCGTCGGC TGGTGGAGGC GGTGCTCCGG
GTATTCGACG GTCTGGCGCG GCAGAAGGAC CTCGAGCTGG TGCTCGAACT GGACAGCAGG
ATCAACGCCG ACGTACTGAT CGACCCGTTG CGCTTCAAAC AGATACTGTC CAATCTGGTC
AGCAACGCCA TCAAGTTCAC CCCGATGGGG CGGATCAAGG TCGTACTGCT GGCAGCCGAA
AGTCCGGACC CGCAACTGCT GCATCTGCAC ATCACCGTTC AGGACAGCGG CATCGGCATC
AGTGTCGAAG ACCAGCAACG TTTGTTCGAG CCGTTCGCCC AGGCCGATAA CACCGGACAA
ATGGCGCGTA CCGGCGCCGG ACTCGGGCTG GTGATCTGCC GCAGCCTGTG CATGATGATG
GGCGGCAACC TTTCGCTCGA CAGCACGCCA GGGCACGGCA CCCGGATCAG CATGAACCTG
GTGCTGACCA CACTTGAACC GCTGACCGGG CAGCCCGTCG TTGCGCAACC GGCAGCCGTC
GTTCATCAGA CCCTCAGAAT CCTGATCGTC GACGATCATC CTGCCAATCG ACTGCTGCTT
TGCCAGCAAC TGAGGTTTCT CGGCCATCAC TGCGAAATGG CCGAAAACGG CGCGCAAGGG
CTCGATCGCT GGAAAAACGA TGCCTTCGAT CTGGTCGTCG CCGATTGCAA CATGCCGATC
ATGAACGGCT ACGACATGAC CGCTGCTATC CGCGAACAGG AGCGCGCCTG CGAACGCCAA
CGCTGCCCTG TCTGGGGCTT CACGGCCAAC GCGCAGCCTG ACGAAATCGA GCGCTGCCGG
GCGGCGGGCA TGGACGATTG CCTGTTCAAA CCCATCAGCC TCTCGATGCT CAGCGAACGG
CTGACAGCCA TTGCCCCGCT GGCGCCCGCA CGTGCCCTGC CCTTCAGCCT CGACAGCGTC
AGCAACCTGA CCGGTGACCG TCCTGAAATG GTTGAACGCC TGCTCGCGCA ACTGCTGCAC
AGCAACCACG AAGACCGGCT ATTACTGGCC AGACTGATGC CGGAGAACAA TCGCCAGAAA
ACCCGCGATC TGGCGCACAG GATCAAGGGC GCGGCACGGA TCATCACAGC TTCAAGGGTG
GTTGATGCCT GTGATGCGCT TGAACTGGCC TGCGAACCGG ACACACCGGA TGAGCAGTTC
TACACCTGCC AGCAGACCGT CGAACTGGCC ATGATCGAGC TTGAGGACGC GCTGATGCTG
CAGCAGGCCA AGCCTGACTG A
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| Protein sequence | MSKRFRQLLI LATSLCIGWG AEAGVHAADH YTLLGRSSPA HMDVKLDNNQ WQWVRGQREL
ILGTSNPDYP PFDITMSGND YEGITADYAG IISDALDLPI RVQRFETRDA AIKALGAGQI
DLLGTANGFE AVDRTIRLSQ PYSVDQPVLV TRVGDNRPLN EGLKGMRLSM VYHYLPPAEV
EASYPGATLK TYPSFQNAIN AVAFNQADVF LGDTISTQYI INKGYLNNVQ MSNFGKHEPN
GFSFAVSSEN PQLLGIINQT LKAIPVDERV NISRRWSTGS DLMLTDQKLQ LTQREERWIA
QHPTVRVVVN EAYAPLTFFD AKGNFRGITA DLLELVRLRT GLRFDVKRSP SLTDMLNQVS
EGQADMIGAL VSSDAREDRL SFTRPYIDNS FVLVTRKEPG APSYLEQMDG KRLAITQGSP
VLDWLSRKYP RVVPLEIDNP FQALDMLSLG RAEGAVISLL SADYFLSSGI FEERLQMTAT
VGEDPALISM ATSRNAIELS SILDKALASI APQDLAAINN RWRVYTPSRA NWHDYERLIY
QIVVGAGLLL LGLLAWNAWM RRQIRQREAA ERALGDQFEF MRALVEGTPH PIYVRDREGM
LRMCNDSYLR VFSAQREDII GKSATEGVLG NAFEAREYAA DYQRVMASNT ALILDRPLRI
GDRQLTIYHW ILPFRDSLGE VQGIIGGWID ISERRQLIED LQAAKEQADA ASRAKSTFLA
TMSHEIRTPM NAVIGMLELA LKRADHGELD RSAIEVAYSS ANDLLDLIGD ILDIARIESG
RLSLNPERAN LRRLVEAVLR VFDGLARQKD LELVLELDSR INADVLIDPL RFKQILSNLV
SNAIKFTPMG RIKVVLLAAE SPDPQLLHLH ITVQDSGIGI SVEDQQRLFE PFAQADNTGQ
MARTGAGLGL VICRSLCMMM GGNLSLDSTP GHGTRISMNL VLTTLEPLTG QPVVAQPAAV
VHQTLRILIV DDHPANRLLL CQQLRFLGHH CEMAENGAQG LDRWKNDAFD LVVADCNMPI
MNGYDMTAAI REQERACERQ RCPVWGFTAN AQPDEIERCR AAGMDDCLFK PISLSMLSER
LTAIAPLAPA RALPFSLDSV SNLTGDRPEM VERLLAQLLH SNHEDRLLLA RLMPENNRQK
TRDLAHRIKG AARIITASRV VDACDALELA CEPDTPDEQF YTCQQTVELA MIELEDALML
QQAKPD
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