Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2090 |
Symbol | |
ID | 3367604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2437628 |
End bp | 2440003 |
Gene Length | 2376 bp |
Protein Length | 791 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652439 |
Product | phosphoenolpyruvate synthase |
Protein accession | YP_235171 |
Protein GI | 66045330 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.721181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00522752 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGGTAGAGT ACGTAGTTTC CCTCGATAAG CTCGGCGTCC ATGATGTAGA GCACGTGGGG GGCAAAAACT CGTCCCTCGG CGAGATGATC AGCAACCTCG CAGGTGCTGG TGTTTCGGTG CCCGGCGGCT TCGCGACTAC CGCCCAGGCT TACCGTGACT TTCTCGAGCT CAGCGGCCTG AACGAGCAGA TCCATGCGGC GCTGGACGCC CTTGATGTCG ATGACGTCAA CGCGCTGGCC CGCACGGGTG CGCAGATTCG TCAGTGGATC ATGGAAGCCG AGTTCCCCGA GCAGCTCAAC GCCCAGATCC GTACTGCGTT TGCCGAGCTC TCTGCCGGTA ACCCGAACCT GGCCGTGGCC GTGCGCTCCT CCGCAACGGC CGAAGATTTG CCGGATGCGT CGTTCGCCGG CCAGCAGGAG ACCTTCCTGA ACATCCGCGG CGTCGAGAAC GTGATCCGCG CGGCCAAGGA AGTCTTCGCT TCACTGTTCA ACGACCGTGC GATTTCCTAC CGCGTACACC AGGGCTTCGA CCACAAGCTG GTCGCGCTGT CTGCGGGTGT GCAGCGCATG GTGCGCTCCG AAACCGGTAC GGCCGGTGTC ATGTTCACCC TCGACACCGA GTCCGGTTTC CGCGATGTGG TGTTCATCAC CGGTGCCTAC GGTCTGGGCG AGACGGTCGT GCAGGGCGCC GTCAACCCCG ACGAATTCTA CGTGCACAAG GACACGCTGG CGGCTGGTCG CCCGGCGATC CTGCGTCGCA ATCTGGGCAG CAAGGCGATC AAGATGATTT ACGGCGAAGA AGCCAAGGCC GGTCGTTCGG TCAAGGTGAT CGACGTCGAG CCTGCCGATC GTGCACGTTT CTGTCTGAGC GATGCCGAAG TGTCCGAACT GGCCAAACAG GCGATGATCA TCGAGAAGCA CTACAAGTGC CCGATGGACA TCGAGTGGGC CAAGGACGGT GACGACGGCA AGCTGTACAT CGTCCAGGCA CGTCCGGAAA CGGTGAAGAG CCGTGCGTCG GCTAACGTCA TGGAACGCTA TCTGCTCAAG GAGACCGGCA AGGTGCTGGT CGAAGGCCGT GCCATCGGTC AGCGCATCGG CGCGGGCAAG GTGCGTATCA TCAAGGACGT GTCCGAGATG GACAAGGTCC AGCCCGGTGA CGTGCTGGTG TCGGACATGA CCGACCCGGA CTGGGAACCG GTGATGAAGC GTGCCAGCGC AATCGTCACC AACCGTGGCG GTCGTACCTG CCACGCCGCG ATCATCGCCC GTGAGCTGGG CATCCCGGCA GTGGTCGGCT GCGGCAACGC CACGCATACC CTTCAGGATG GCCAGGGTGT CACGGTTTCC TGTGCAGAGG GCGACACCGG TTATATCTTC GAAGGCGAGC TGGGCTTCGA CATCAAGACC AACTCGGTCG ATGCCATGCC TGATCTGCCG TTCAAGATCA TGATGAACGT CGGCAACCCG GACCGTGCCT TTGATTTCGC CCAGTTGCCC AATGCCGGTG TCGGCCTGGC GCGTCTGGAG TTCATTATCA ACCGCATGAT CGGCGTGCAC CCCAAGGCGC TGCTCAACTA TTCGGTGTTG CCACCGGAAA TCAAGGAAAG CGTCGACAAG CGCATCGCCG GTTACGACGA TCCGGTCGGT TTCTATGTCG ACAAGCTGGT CGAGGGCATC AGCACTCTGG CCGCCGCGTT CACGCCGAAA AAAGTCATCG TGCGCCTCTC GGACTTCAAG TCCAACGAGT ACGCGAACCT GATCGGCGGC AAGCTCTACG AGCCCGAAGA AGAAAACCCG ATGCTGGGCT TCCGCGGTGC GTCGCGCTAT ATCAGCGAGA ACTTCCGTGA CTGCTTCGAG CTGGAGTGCC GTGCGCTCAA GCGTGTGCGC GAGGAGATGG GCCTGACCAA CGTCGAGATC ATGGTGCCGT TCGTCCGCAC CCTGGGCGAG GCGAGCCAGG TGATCGATCT GCTGGCCGCC AACGGCCTGA AGCGTGGCGA AAACGGCCTG CGCATCATCA TGATGTGCGA GCTGCCGTCC AACGCGATTC TGGCGGAAGA GTTCCTCGAG TATTTCGACG GCTTCTCCAT CGGCTCCAAC GACCTGACTC AGCTGACGCT CGGTCTCGAC CGTGACTCCG GTGTGATCGC TCACCTGTTC GACGAGCGTA ACCCGGCGGT CAAGAAGCTG CTGTCCAACG CCATTCAGGC GTGCAACAAG GCCGGCAAGT ACATCGGCAT CTGCGGGCAG GGGCCTTCCG ATCACCCGGA TCTGGCGCGC TGGCTGATGG ATCAGGGCAT CGAGAGTGTC TCGCTCAACC CTGATTCGGT ACTGGAGACC TGGTTCTTCC TCGCCGAGGC ACAGGCGCCT GTCTGA
|
Protein sequence | MVEYVVSLDK LGVHDVEHVG GKNSSLGEMI SNLAGAGVSV PGGFATTAQA YRDFLELSGL NEQIHAALDA LDVDDVNALA RTGAQIRQWI MEAEFPEQLN AQIRTAFAEL SAGNPNLAVA VRSSATAEDL PDASFAGQQE TFLNIRGVEN VIRAAKEVFA SLFNDRAISY RVHQGFDHKL VALSAGVQRM VRSETGTAGV MFTLDTESGF RDVVFITGAY GLGETVVQGA VNPDEFYVHK DTLAAGRPAI LRRNLGSKAI KMIYGEEAKA GRSVKVIDVE PADRARFCLS DAEVSELAKQ AMIIEKHYKC PMDIEWAKDG DDGKLYIVQA RPETVKSRAS ANVMERYLLK ETGKVLVEGR AIGQRIGAGK VRIIKDVSEM DKVQPGDVLV SDMTDPDWEP VMKRASAIVT NRGGRTCHAA IIARELGIPA VVGCGNATHT LQDGQGVTVS CAEGDTGYIF EGELGFDIKT NSVDAMPDLP FKIMMNVGNP DRAFDFAQLP NAGVGLARLE FIINRMIGVH PKALLNYSVL PPEIKESVDK RIAGYDDPVG FYVDKLVEGI STLAAAFTPK KVIVRLSDFK SNEYANLIGG KLYEPEEENP MLGFRGASRY ISENFRDCFE LECRALKRVR EEMGLTNVEI MVPFVRTLGE ASQVIDLLAA NGLKRGENGL RIIMMCELPS NAILAEEFLE YFDGFSIGSN DLTQLTLGLD RDSGVIAHLF DERNPAVKKL LSNAIQACNK AGKYIGICGQ GPSDHPDLAR WLMDQGIESV SLNPDSVLET WFFLAEAQAP V
|
| |