| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2085 |
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| Symbol | prpB |
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| ID | 3367599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2430393 |
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| End bp | 2431286 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652434 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_235166 |
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| Protein GI | 66045325 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.36601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00432704 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCATG ACAACAGCAC TCCCGGCCAG CGTTTCCGCG ATGCAGTTAC CAGCGAGCAG
CCGCTGCAAG TGGTCGGCGC GATCAATGCC AACCACGCAC TGCTCGCCAG GCGTGCCGGG
TTCAAGGCTA TTTATCTGTC GGGTGGCGGA GTCGCTGCAG GATCTCTGGG CATTCCGGAC
CTGGGAATCA CTGGGCTTGA AGACGTACTG ATCGATGTGC GGCGCATCAC CGACGTCTGC
GATCTGCCGT TGCTGGTGGA CGTCGACACC GGTTTCGGCT CTTCGGCTTT CAATGTGGCG
CGTACCGTGC GCTCGATGAT CAAGGCCGGG GCGGCGGCGA TTCACATCGA GGATCAGGTG
GGCGCCAAGC GTTGCGGGCA CCGTCCCAAC AAGGAAATCG TTTCTCAGCA GGAAATGGTC
GACCGGATCA AGGCTGCCGT GGATGCCCGG ACTGACGACA GCTTCGTGAT CATGGCGCGT
ACCGATGCGC TGGCGGTTGA AGGGCTGGAG TCGGCGCTGG AGCGTGCCGC TGCCTGTATT
GAAGCCGGTG CGGATATGGT GTTTCCAGAG GCCATCACCG AACTGGCGAT GTACAAGCAA
TTCGCCAACC GCGCAGGCGT GCCGATCCTC GCCAACATTA CCGAGTTCGG CGCCACGCCG
TTGTTTACGG TCGATGAGCT GCGCGAGGCG GACGTCTCGC TGGTGCTGTA TCCGCTTTCC
GCATTCCGCG CGATGAACAA GGCTGCAGAA AATGTCTACG GCGCAATCCG CCGTGACGGC
AGCCAGAAAA ACGTGATTGA CAGCATGCAG ACGCGCATGG AGCTGTATGA CGCGATCGAT
TACCACACAT TCGAACAGAA GCTGGATGCG CTGTTTGCGC AGAAGAAGGG GTGA
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| Protein sequence | MSHDNSTPGQ RFRDAVTSEQ PLQVVGAINA NHALLARRAG FKAIYLSGGG VAAGSLGIPD
LGITGLEDVL IDVRRITDVC DLPLLVDVDT GFGSSAFNVA RTVRSMIKAG AAAIHIEDQV
GAKRCGHRPN KEIVSQQEMV DRIKAAVDAR TDDSFVIMAR TDALAVEGLE SALERAAACI
EAGADMVFPE AITELAMYKQ FANRAGVPIL ANITEFGATP LFTVDELREA DVSLVLYPLS
AFRAMNKAAE NVYGAIRRDG SQKNVIDSMQ TRMELYDAID YHTFEQKLDA LFAQKKG
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