Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2077 |
Symbol | cysB |
ID | 3367591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2422181 |
End bp | 2423155 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652426 |
Product | transcriptional regulator CysB |
Protein accession | YP_235158 |
Protein GI | 66045317 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0047105 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGCTCC AACAACTGCG CTACATTTGG GAAGTGGCGC ACCACGACCT CAACGTTTCC GCGACGGCCC AGAGCCTTTA CACCTCCCAG CCCGGCATCA GCAAGCAGAT CCGTCTGCTT GAAGATGAAC TGGGCGTCGA GGTTTTCGCC CGCAGCGGCA AGCACCTGAC GCGTGTGACA CCTGCAGGCG AGCGCATCAT CACGACAGCG GGCGAGATCC TGCGCAAGGT CGAGAGCATC AAGCAGATTG CCCAGGAGTT CTCCAACGAG AAGAAGGGCA CGCTGTCGAT CGCCACCACC CACACCCAGG CGCGCTATGC CTTGCCGTCG GTGATCAGCA ACTTCATCAA GCAATACCCT GATGTTGCGC TGCACATGCA CCAGGGCTCA CCGATGCAGA TCGCCGAAAT GGCCGCTGAC GGGACGGTCG ATTTCGCTAT CGCCACCGAG GCGCTCGAGC AGTTCAGCGA TCTGGTGATG ATGCCGTGCT ATCGCTGGAA CCGTTGCGTT GTCGTGCCAC AGGGCCACCC GTTGACCAAG GCACCCAAGC TGACCCTGGA ACTGCTGGCC GAATACCCGA TCGTGACTTA CGTCTTCGGT TTCACCGGTC GTTCCAAGCT GGATGAGGCG TTCAGCCATC GCGGGCTGGT GCCCAAGGTG GTGTTTACGG CGGCGGACGC CGACGTGATC AAGACCTACG TCAGGCTGAA TCTGGGTGTG GGTATCGTGG CGAGAATGGC GGTAGACGAG GAAGTGGACA GCGACCTGGT GGTGCTCGAT GCCAGTGATC TGTTCGAGTC CAGCGTTACA AAAATCGCTT TCCGTCGCGG CACTTTCCTG CGGGGCTTCA TGTGCGATTT CATCGAGAAA TTCGCGCCGC ACCTGACCCG CGAAGTCATG GCCAAGGCGA TTCAGTGCCA TAACAAGCAG GAAATGGAAG AGCTGTTTGC CAATGTCGAG CTGCCGGTGC ATTAG
|
Protein sequence | MKLQQLRYIW EVAHHDLNVS ATAQSLYTSQ PGISKQIRLL EDELGVEVFA RSGKHLTRVT PAGERIITTA GEILRKVESI KQIAQEFSNE KKGTLSIATT HTQARYALPS VISNFIKQYP DVALHMHQGS PMQIAEMAAD GTVDFAIATE ALEQFSDLVM MPCYRWNRCV VVPQGHPLTK APKLTLELLA EYPIVTYVFG FTGRSKLDEA FSHRGLVPKV VFTAADADVI KTYVRLNLGV GIVARMAVDE EVDSDLVVLD ASDLFESSVT KIAFRRGTFL RGFMCDFIEK FAPHLTREVM AKAIQCHNKQ EMEELFANVE LPVH
|
| |