Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2066 |
Symbol | |
ID | 3367580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2411391 |
End bp | 2413907 |
Gene Length | 2517 bp |
Protein Length | 838 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637652415 |
Product | hypothetical protein |
Protein accession | YP_235147 |
Protein GI | 66045306 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.134664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.252651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTT TGCCTTTTGC CCGCCTGCTG AGCCTCGCTG TCCGCCAACT GATGCGTGAT GCCCGCGCAG GAGAGTTGCG AGTACTGTTC TTTGCCCTTC TGGTCGCCGT GGCGGCGAGC ACCGCCATCG GTTATTTCGG CGCCCGTCTG AACGGCGCGA TGCTGCTGCG GGCGACCGAG TTCCTGGGTG CCGATCTGAT CCTCGAAGGC TCGAGCCCGG CGCGTGCCGA GCAGGTCGAA GAAGGCAAAC GTCTGCAACT CAAGCATGCG CAGATCGTGG TGTTTTCCAG CGTGATCGCG ACCGACGCAG GTATCCAGCT GTCGAGCATC AAGGCGGTGG ACGACGCTTA CCCATTGCGC GGCGAACTGA AAAGCGCCGC AGACCTGTAC CAGCCGGAAC AGGCCGGCAG CGGTCCGCAA CCGGGTGAAG CCTGGGTCGA GGCACGCCTG CTTCCCGCCG TCGCCCTGAA GGTCGGAGAC GACCTCGACG TCGGCTCCAA AACCTTGAAA CTGACCCGCA TACTGACTTA CGAGCCAGAC CGGGCAGGCA ACTTCTACAG CCTGACCCCG CGCGTGATGA TCAACCTGCA GGACCTCGCT GCCACCGGCG TGGTGCAGCC GGGCAGCCGG GTCAGCTATC GAGAGATGTG GAGCGGCCCG CCGGAAGCAC TGGCGGCCTA TCGCAAAGCC ATCGAACCGG GTCTTGAGCC GCATCAGGAA ATCAAGGACG CCCGCGATGG TAGCCAGCAG ATCGGCGGCG CACTGGGCAA GGCCGAACGT TATCTGAATA TGGCCAGTCT GGTCGCCGTC TTGCTGGCGG GCGTTGCTGT CGCGCTGTCG GCATCCCGAT TCGCCGCACG GCGCTTCGAT GCCAGCGCCC TGCTGCGCTG CCTGGGGCTG TCGCGCGGGG AGACGATGAC CCTGTTCAGC CTGCAACTGG CGATCATCGG CTTGCTGGCC AGCCTGAGTG GTGCCTTGCT GGGCTGGCTT GCACAACTCG GGCTGTTCGC GCTGCTGCAA AATCTGCTCC CGGCGACCGT TCCGCCAGGC GGCGTACTGC CTGCGCTGGC CGGCATGGGC ACCGGGTTGG TAGCGCTGGC CGGTTTTGCC CTGCCGCCGC TGGCTGCACT GGGTCGCGTG CCGCCGTTGC GCGTGTTGCG TCGCGACATG CTGCCGATCC CCGCCAGTTC CTGGCTTGTG TATGGCGCAG CGCTGCTCGC GCTGGGCCTG ATCATGTGGC GCCTGAGCCT GGACCTGGTC CTGACCTTCG CCCTGCTGGG TGGCGGCATC GTCGCCGCGC TGCTGCTCGG CAGTCTGCTG TTACTGGCGC TCAACAGCCT GCGCCGCCTG CTGTCCGGCG CCTCGCTGCC CTGGCGACTG GGTTTGGGAC AACTGCTGCG TTACCCGCTG GCCGCTGCCG GCCAATCACT GGCTTTCGGC CTGATTCTGC TGTCGATGGG CTTGATCGCG CTGCTGCGCG GTGAGCTGCT CGACACCTGG CAAAATCAGT TGCCCAAGGA TGCACCGAAC TATTTCGTGC TCAACGTACT GCCAGCCGAT AAAGAAAACT TCGCCCAAAC CCTGAGCAAG CTGTCCACTC ACGCGGCGCC CCTTTACCCG GTGGTGCCTG GACGCCTGAC CAGCATCAAC GGTGAACCGG TCAGCAACTT CGTGACCAAG GATTCGCGCG GTGAAAATGC CACGCGTCGC GACCTGAGCC TGACCTGGGC CGCCGAGCTT CCCGAGGGCA ATACCCTGAC TGCCGGCAGT TGGTGGAAAG CGTTGCCTGC GTCCGCGCAG AGCGACGCGA CGCCCGGTGT CTCGATCGAG GCTAAACTGG CCGACAGCCT GAAAATCAAA CTGGGCGACC GCCTGAGCTT CATCGTCGGT GGACTGACCC GCGAAGCCGT GGTCACCAGC CTCAGGAACG TGAACTGGGA TACCTTCCAG CCCAACTTCT TCATGATTTT CCAACCCGGC ACCCTTGCCG ACTTGCCGAC CACGTACCTG ACCAGCTTTT ACCTGCCACC CGGCCAGGAC AAGCAGATCG TCGAGCTGTC GCGCGCCTAC CCGTCCATCA GCATTCTGGG GGTAGAGGCC CTGCTGGCAC AGGTACGCAG CATTCTTGAT CAGGTCACCC TGGCTGTGCA GTTCGTCCTG CTGTTCGTGC TGGCCGCAGG TATCGCCGTG CTGTTTTCCG GATTGCAGGC CACGCTGGAC GAACGCATAC GGCAAGGCGC ACTGCTGCGC GCACTGGGCG CAGAGCGAGC GCTGCTGATC AAGTCGCGAC GTATCGAATT CGGTTTGCTG GGGGCCGCGA GCGGTGTGCT GGCGGCACTG GGTTGTGAGC TGGTGAGCTT CGTGCTGTAC CGCTACGCCT TTTCGCTGGA ATGGCAACCG CATCCGTGGC TACTGCTGCT CCCGGTCATC GGCGCCCTGC TGGTCGGTGG TGCCGGTGTA TTCGGCACCC GCCGCGCACT GAACGTCAGC CCGCTGACCG TGCTGCGCGA GGGTTGA
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Protein sequence | MARLPFARLL SLAVRQLMRD ARAGELRVLF FALLVAVAAS TAIGYFGARL NGAMLLRATE FLGADLILEG SSPARAEQVE EGKRLQLKHA QIVVFSSVIA TDAGIQLSSI KAVDDAYPLR GELKSAADLY QPEQAGSGPQ PGEAWVEARL LPAVALKVGD DLDVGSKTLK LTRILTYEPD RAGNFYSLTP RVMINLQDLA ATGVVQPGSR VSYREMWSGP PEALAAYRKA IEPGLEPHQE IKDARDGSQQ IGGALGKAER YLNMASLVAV LLAGVAVALS ASRFAARRFD ASALLRCLGL SRGETMTLFS LQLAIIGLLA SLSGALLGWL AQLGLFALLQ NLLPATVPPG GVLPALAGMG TGLVALAGFA LPPLAALGRV PPLRVLRRDM LPIPASSWLV YGAALLALGL IMWRLSLDLV LTFALLGGGI VAALLLGSLL LLALNSLRRL LSGASLPWRL GLGQLLRYPL AAAGQSLAFG LILLSMGLIA LLRGELLDTW QNQLPKDAPN YFVLNVLPAD KENFAQTLSK LSTHAAPLYP VVPGRLTSIN GEPVSNFVTK DSRGENATRR DLSLTWAAEL PEGNTLTAGS WWKALPASAQ SDATPGVSIE AKLADSLKIK LGDRLSFIVG GLTREAVVTS LRNVNWDTFQ PNFFMIFQPG TLADLPTTYL TSFYLPPGQD KQIVELSRAY PSISILGVEA LLAQVRSILD QVTLAVQFVL LFVLAAGIAV LFSGLQATLD ERIRQGALLR ALGAERALLI KSRRIEFGLL GAASGVLAAL GCELVSFVLY RYAFSLEWQP HPWLLLLPVI GALLVGGAGV FGTRRALNVS PLTVLREG
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