Gene Psyr_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2049 
Symbol 
ID3367563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2393905 
End bp2394519 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content63% 
IMG OID637652398 
Productpotassium-transporting ATPase subunit C 
Protein accessionYP_235130 
Protein GI66045289 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0553231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.333592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTCG GCGTGCAGCC TCACCTGATT GAGGATGTGC AGATGTCCAA TGTATTGCGT 
CCGGCCTTGA GCCTGATCGT GTTGATGAGC CTGATTACCG GTGTGGCGTA TCCGCTGGTG
GTCACCGGAG TGGCACAAGT GGCGTTTCCG GCCCAGGCCA ATGGCAGCCT GGTGTATGAC
GCGTCGGGCA AGGTGCGCGG CTCGGCGCTG ATCGCCCAGT CATTCACCGG CGATGAGTGG
TTTCAGTCGC GTCCTTCGGC TGGCGCATTC GCGACCGTGG CCAGTGGCGC AAGCAACTTC
GCACCGAGCA ACCCGGCACT GGCGACACGC GTGAAAGAGG ATGCCGCGAA ACTGGCCAAC
GCCTCGCAGG AACCGATACC AATGGCCTTG CTGACCACCT CCGGCAGCGG CCTTGACCCG
CACCTCTCGC CTGAAGCGGT GGCCTGGCAG GCCGGGCGTG TTGCAGCGGC GCGCCAGTTG
CCGCTGGACA AAGTGCAGGC GCTGATCGAC GCCAATACCC AGCGCCCGCT GATCGGCCCA
CCCGTGGTTA ACGTATTGGC CTTGAATATG AGCCTGAATC AGTTACCGTC TGCACCGCGC
AACGCGCAGC TGTAA
 
Protein sequence
MPVGVQPHLI EDVQMSNVLR PALSLIVLMS LITGVAYPLV VTGVAQVAFP AQANGSLVYD 
ASGKVRGSAL IAQSFTGDEW FQSRPSAGAF ATVASGASNF APSNPALATR VKEDAAKLAN
ASQEPIPMAL LTTSGSGLDP HLSPEAVAWQ AGRVAAARQL PLDKVQALID ANTQRPLIGP
PVVNVLALNM SLNQLPSAPR NAQL