Gene Psyr_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1964 
Symbol 
ID3367474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2275359 
End bp2276225 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content63% 
IMG OID637652309 
Producthypothetical protein 
Protein accessionYP_235045 
Protein GI66045204 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00574868 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.693869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CATTGCTGCC CCTGTCCGCC CTGCTCGGCC TGTTGCTATG CGGCACCACC 
CTCGCCGCCA CGCCCGCAGC GGTGCCCGCG CCCGGAAAAG TGTTCAAGGA CTGCAAGGAC
TGCCCGGAAA TGGTCGTGCT GCCTGCGGGC ACTTTCACCA TGGGTGCGCC CGAAGAGGAA
CTGGGTCGTC AGCCGGACGA AGGCCCGCTG CATGACGTGA CCTTCGCCAA ACCGTTCGCC
ATCAGCCGCT TTCAGGTACT GGCTGGCGAA TGGGCCGCCT ATATCAAAAG CTCCGGTTAC
AAAATGCCGG ATGGCGATAC CCGGCCGGGC CGCGAGTGCA AGGCCGGCAA GCCGCGCTAC
CCGCTGAGCC CGCGTCAGCC TGCGGTGTGC ATGGACTGGA ACGAAGCCAA GGCGTATGTC
GAATGGCTGT CGAAAAAAAC CGGCAAGTCC TACCACATGG TCAGCGAAGC CCAGCGTGAA
TACGCGGCAC GCGGCGGCAG CAAGGGCTCG TTCCCGTTTC CGATGGACGA AGGCAAGCCC
TACAGCATTG CCAAACACGC CAACACCTAC GGCCCGGAAG ACGGTTTCAG CTACACAGCG
CCTGCCGGCA GCTACAGCCC CAACGATTTC GGCATCTACG ACGCCCACGG CAACGTCTAC
GAGTGGACCG CCGATTGCGA GACCAGCAAC TACAACGGCG CGCCCACCGA TGGCAGCGCG
TGGCTGGCCG GTGATTGCAC CTGGAAGATG ATTCGCGGCA ATGACTGGAC CGAAGCGCCG
ATCTTCTCGC GCTCTGGCAA CCGCAACAGC CGCCAGCCGG ATGTACGGGG TGACTGGCTG
GGTTTCCGGG TCGCCCGCGA CCTCTGA
 
Protein sequence
MKKTLLPLSA LLGLLLCGTT LAATPAAVPA PGKVFKDCKD CPEMVVLPAG TFTMGAPEEE 
LGRQPDEGPL HDVTFAKPFA ISRFQVLAGE WAAYIKSSGY KMPDGDTRPG RECKAGKPRY
PLSPRQPAVC MDWNEAKAYV EWLSKKTGKS YHMVSEAQRE YAARGGSKGS FPFPMDEGKP
YSIAKHANTY GPEDGFSYTA PAGSYSPNDF GIYDAHGNVY EWTADCETSN YNGAPTDGSA
WLAGDCTWKM IRGNDWTEAP IFSRSGNRNS RQPDVRGDWL GFRVARDL