Gene Psyr_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1941 
Symbol 
ID3367451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2214084 
End bp2215268 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content63% 
IMG OID637652286 
Productsensor histidine kinase 
Protein accessionYP_235022 
Protein GI66045181 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGTC CTCCCCATGA CCCGGCAAGC GCACTGGCCA TTCGCAACCA GTATCGCCAG 
TCGCAAAGCC GCGCCGCACG TCTTCGTCTG CTGGTCGATA CCGGTCAGGA GCTGACTCAT
CTGCCACCTC AAGCCATGCG CCAGCGCGTG CTGCAACGCG CGTGCGCATT CGTGGCGATG
GACCATGGCC TGCTGCTGGA ATGGAGCGCC GACAACGGTG TGCAGACCAC CGCCAGCCAT
GGCAGTGCCG AACGCCTCGC CACGCTTGAA ACCGCTGCCG ACCCGCTGGC CATCGGCCCG
CAATGGCTGG ACAGGCCCGC TGCCGATCTG CCGTGCATGC TGCTGTTACC GTTGCGTGGC
GCCGATGAAG GCTCTTTTGG CACCCTGCTG CTGGCCAACA GCGTGGGCAT CAATGCACCG
GACAACGAGG ACATCGAGTC GCTGCAATTG CTGGCGACGT TGCTGGCGGC ACACCTGGAA
AACAATCGGC TGCTTGACGC GCTGGTGGTC AGAGAGCAGA CCATGTCCGA ACTGGTCCGC
CAGTTGTTCA CCGCTCAGGA AGACGAACGC AAGCGCATGG CCTACGACCT GCATGATGGT
CTGGCTCAGA CACTGGCCGG TCTGCACCAG CGATTGCAGG GCTTTGCCGG TCGCTGTCCG
GACCTGCCCG AGCCGCTGGA CGCCGATCTG CAGGCCATTC TCAAGCTGGC GCAGCACTGC
GTGGGTGAAG GTCGACAGTT GATCAGTGGC CTGCGTCCTA GCGTGCTCGA CGATTTCGGC
CTGCTGCAGG CAGTCGACAA GGACGCCGAC CGGTTGCGCG AAGCCGGAGT CGCGGTGCAC
TGGCGCTCGC GCTCCCTGAC CCGCCTGCCC AGCCATCTGG AAATCGCCCT GTTCCGTATT
GCCCAGGAAG GCATCAACAA TGTGCTCAAA CACGCCAGTG CAGGCCGCGT AGAATTGGCC
CTGGAACTGA GTGAAGAGCA CATTTCACTG CTGCTGGAAG ACAACGGCAG TGGTTTCATC
ACCCAGAAAC CGTTTAATGG CAAAGGCGTC CAGAAACTGG GCCTGGTGGC CATGCAAGAG
CGCGCCAGCC TGCTCGGCGG GCGCCTGACC TGCGTCAGTC GGCCCGGGCA CGGCACCCGA
CTGCGCGCCA TCGTTCCTTT TACCGCAGAC AAGGCAATGA CATGA
 
Protein sequence
MQSPPHDPAS ALAIRNQYRQ SQSRAARLRL LVDTGQELTH LPPQAMRQRV LQRACAFVAM 
DHGLLLEWSA DNGVQTTASH GSAERLATLE TAADPLAIGP QWLDRPAADL PCMLLLPLRG
ADEGSFGTLL LANSVGINAP DNEDIESLQL LATLLAAHLE NNRLLDALVV REQTMSELVR
QLFTAQEDER KRMAYDLHDG LAQTLAGLHQ RLQGFAGRCP DLPEPLDADL QAILKLAQHC
VGEGRQLISG LRPSVLDDFG LLQAVDKDAD RLREAGVAVH WRSRSLTRLP SHLEIALFRI
AQEGINNVLK HASAGRVELA LELSEEHISL LLEDNGSGFI TQKPFNGKGV QKLGLVAMQE
RASLLGGRLT CVSRPGHGTR LRAIVPFTAD KAMT