| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1936 |
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| Symbol | |
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| ID | 3367446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2209059 |
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| End bp | 2210078 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637652281 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_235017 |
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| Protein GI | 66045176 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.564844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.370687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTG AAAGCCTAGA AACCCCCGTA AATATTGGCC AACCAGCCCC AGTGCTATCC
CGCCGCTTCT CCGTCGCCCC CATGATGGAC TGGACCGACC ACCACTGCCG CTACTTCATG
CGCAAGCTCT CAAAGCATGC CTTGCTCTAC ACCGAGATGG TCACCACCGG TGCCTTGCTG
CATGGCGACC GCGAGCGGTT CCTGCGCCAT GATGAAACCG AGCATCCGCT GGCATTGCAG
TTGGGTGGCA GCACGGCGGC GGATCTGGCT GCGTGTTCGC GTCTGGCGCA AGAGGCGGGG
TATGACGAGG TCAATCTGAA CGTCGGTTGC CCGAGTGACC GGGTGCAGAA CAACATGATC
GGTGCGTGCC TGATGGCGCA TCCTGAGCTG GTGGCGGATT GCGTGAAGGC GATGCGCGAT
GCGGTCGGTA TTCCGGTCAC GGTCAAGCAC CGCATCGGTA TCAACGGCCG TGACAGCTAC
GCCGAGTTGT GTGATTTCGT CGGCAAGGTT CAGGAGGCGG GTTGCGAGAG TTTCACAGTT
CATGCGCGTA TCGCGATTCT CGAAGGGCTG TCTCCCAAGG AAAACCGCGA TATTCCGCCA
CTGCGTTATG ACGTGGTCGC GCAGTTGAAG TCTGACTTTC CCGGCCTGGA GATTGTGCTC
AATGGCGGCA TCAAGACGCT GGAGCAGTGC AGTGAGCATT TGCAGACGTT CGATGGCGTG
ATGTTGGGGC GTGAGGCTTA TCACAACCCG TATCTGTTAG CGCATGTCGA TCAGCAGTTG
TTCGGCAGCA CTGCGCCGGT CATCAGTCGT TACGATGCGT TGGAGTCGAT GCGGCCGTAC
ATTGCGGCGC ACATTGCCAG CGGCGGCAAC ATGCACCACG TCACCCGGCA TATGCTCGGT
CTTGGTCTGG GTTTCCCTGG CGCGCGACGC TTCCGTCAGT TGCTGTCGGT TGACATACAC
AAGGCCGAAA ATCCCATGCT GTTGCTGGAT CAGGCCGCGG CGTTTCTTCA GGGGCATTGA
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| Protein sequence | MTPESLETPV NIGQPAPVLS RRFSVAPMMD WTDHHCRYFM RKLSKHALLY TEMVTTGALL
HGDRERFLRH DETEHPLALQ LGGSTAADLA ACSRLAQEAG YDEVNLNVGC PSDRVQNNMI
GACLMAHPEL VADCVKAMRD AVGIPVTVKH RIGINGRDSY AELCDFVGKV QEAGCESFTV
HARIAILEGL SPKENRDIPP LRYDVVAQLK SDFPGLEIVL NGGIKTLEQC SEHLQTFDGV
MLGREAYHNP YLLAHVDQQL FGSTAPVISR YDALESMRPY IAAHIASGGN MHHVTRHMLG
LGLGFPGARR FRQLLSVDIH KAENPMLLLD QAAAFLQGH
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