Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1929 |
Symbol | |
ID | 3367439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2202390 |
End bp | 2203679 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637652275 |
Product | hypothetical protein |
Protein accession | YP_235011 |
Protein GI | 66045170 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.036812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGACC TGTTTCCCGG CCATTTTTCC AGTTCTGATC AAGACATTGA GAACCTATGG AAAGACTGTA TCTTCGTCTT GGACGCCAAC GTACTGCTGA GCCTTTATAG GTATTCAGAT TCGACGCGAT CAGAACTGTT CAAAGTCTTC GACACCATGT CTGACAGACT CTGGATCCCT CATCAGGTCG CACAGGAATA CCTAACCAAC CGATTACTAG TCATCAGCGA ACAAGCTAAA TACTATGACG ATGCAAGTAA GCGTATAGAA GGACTGAAGA AGCTTCTTGA AAACAGCAAC CAACATCCTT TTGTTTCGTC TAAAACGCTG AATGCTGCGA GTAAAGTTTT TGAGCAGCTT ACTAAAGAAC TATCAGAAAA CCGCCTTATA CATGATAAAA GAATCACCAA GGACGAGATA AAAGACAAAC TGGAAATTTT ATTCTCATCA AATGTTGGGC CAGCTTATTC CAAAGATAGA CTTGAAGAAG TTTTGATAGC GGGCAAAACA AGATATGATG AAAAGACGCC ACCTGGATTC AGTGATTCAA AAAAAGGTGG AGATTCTCAA CTGTTCTCGG ACCGGTGCAA ACCTTACGGA GACTATATCG TTTGGCTACA AATGATGGAT CACTCCAGAC TAGTCGAAAA ATCAATAATC TTTGTTACCG GCGACGTAAA AGAGGATTGG TGGACTGTAT TTCAAGGTAA AACAGTCGGT CCTCACCCAT CATTGGTTCA AGAGTTTATC GATTCAACTG GATACTTATT TTATATGTAT ACCCCAGATA AATTTTTACA ACGAGCAAGC ATTGATCTCG GAATTAACAA TATAGAGCTA GAAAAGTCCG CTCAAGAAAT AAGAGACTTA CAAAAAGAAG ATGATTTACT ACAAGTTATT TTCGATGAAA CAATAAACTC TATTTGGCCT GAGGCCAAAG ACTCAAAGCC GGATATATTC GGGCAGAGCA ACACAAGAAA AAGAATTATC CGCCCACAAT CGGACAGCTT ACCTGAGCAG CCGGAGTTTC CTTGGTCTGA GACATCGTTT TCTAAAGACG GATACAAGAA ATCAAATTCA CATAATGCCC GTATGGGTGT CATGCATGAG CTGAAGAGAC TAACGGCTGA AAAGATCGAG CTTGAACACT TTGTGACCAG CAGCATGCGC GAGGGCTCGC TAAACAGCAG AGATTACTCA CTACTAATGA TAAGACTGAA AAAAATCGAG AAAGAGATTC AACTCATGAG CGGCCAAGTT AACGATAACG ACCCATACAG TGAAATATAG
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Protein sequence | MKDLFPGHFS SSDQDIENLW KDCIFVLDAN VLLSLYRYSD STRSELFKVF DTMSDRLWIP HQVAQEYLTN RLLVISEQAK YYDDASKRIE GLKKLLENSN QHPFVSSKTL NAASKVFEQL TKELSENRLI HDKRITKDEI KDKLEILFSS NVGPAYSKDR LEEVLIAGKT RYDEKTPPGF SDSKKGGDSQ LFSDRCKPYG DYIVWLQMMD HSRLVEKSII FVTGDVKEDW WTVFQGKTVG PHPSLVQEFI DSTGYLFYMY TPDKFLQRAS IDLGINNIEL EKSAQEIRDL QKEDDLLQVI FDETINSIWP EAKDSKPDIF GQSNTRKRII RPQSDSLPEQ PEFPWSETSF SKDGYKKSNS HNARMGVMHE LKRLTAEKIE LEHFVTSSMR EGSLNSRDYS LLMIRLKKIE KEIQLMSGQV NDNDPYSEI
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