Gene Psyr_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1929 
Symbol 
ID3367439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2202390 
End bp2203679 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content41% 
IMG OID637652275 
Producthypothetical protein 
Protein accessionYP_235011 
Protein GI66045170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.036812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACC TGTTTCCCGG CCATTTTTCC AGTTCTGATC AAGACATTGA GAACCTATGG 
AAAGACTGTA TCTTCGTCTT GGACGCCAAC GTACTGCTGA GCCTTTATAG GTATTCAGAT
TCGACGCGAT CAGAACTGTT CAAAGTCTTC GACACCATGT CTGACAGACT CTGGATCCCT
CATCAGGTCG CACAGGAATA CCTAACCAAC CGATTACTAG TCATCAGCGA ACAAGCTAAA
TACTATGACG ATGCAAGTAA GCGTATAGAA GGACTGAAGA AGCTTCTTGA AAACAGCAAC
CAACATCCTT TTGTTTCGTC TAAAACGCTG AATGCTGCGA GTAAAGTTTT TGAGCAGCTT
ACTAAAGAAC TATCAGAAAA CCGCCTTATA CATGATAAAA GAATCACCAA GGACGAGATA
AAAGACAAAC TGGAAATTTT ATTCTCATCA AATGTTGGGC CAGCTTATTC CAAAGATAGA
CTTGAAGAAG TTTTGATAGC GGGCAAAACA AGATATGATG AAAAGACGCC ACCTGGATTC
AGTGATTCAA AAAAAGGTGG AGATTCTCAA CTGTTCTCGG ACCGGTGCAA ACCTTACGGA
GACTATATCG TTTGGCTACA AATGATGGAT CACTCCAGAC TAGTCGAAAA ATCAATAATC
TTTGTTACCG GCGACGTAAA AGAGGATTGG TGGACTGTAT TTCAAGGTAA AACAGTCGGT
CCTCACCCAT CATTGGTTCA AGAGTTTATC GATTCAACTG GATACTTATT TTATATGTAT
ACCCCAGATA AATTTTTACA ACGAGCAAGC ATTGATCTCG GAATTAACAA TATAGAGCTA
GAAAAGTCCG CTCAAGAAAT AAGAGACTTA CAAAAAGAAG ATGATTTACT ACAAGTTATT
TTCGATGAAA CAATAAACTC TATTTGGCCT GAGGCCAAAG ACTCAAAGCC GGATATATTC
GGGCAGAGCA ACACAAGAAA AAGAATTATC CGCCCACAAT CGGACAGCTT ACCTGAGCAG
CCGGAGTTTC CTTGGTCTGA GACATCGTTT TCTAAAGACG GATACAAGAA ATCAAATTCA
CATAATGCCC GTATGGGTGT CATGCATGAG CTGAAGAGAC TAACGGCTGA AAAGATCGAG
CTTGAACACT TTGTGACCAG CAGCATGCGC GAGGGCTCGC TAAACAGCAG AGATTACTCA
CTACTAATGA TAAGACTGAA AAAAATCGAG AAAGAGATTC AACTCATGAG CGGCCAAGTT
AACGATAACG ACCCATACAG TGAAATATAG
 
Protein sequence
MKDLFPGHFS SSDQDIENLW KDCIFVLDAN VLLSLYRYSD STRSELFKVF DTMSDRLWIP 
HQVAQEYLTN RLLVISEQAK YYDDASKRIE GLKKLLENSN QHPFVSSKTL NAASKVFEQL
TKELSENRLI HDKRITKDEI KDKLEILFSS NVGPAYSKDR LEEVLIAGKT RYDEKTPPGF
SDSKKGGDSQ LFSDRCKPYG DYIVWLQMMD HSRLVEKSII FVTGDVKEDW WTVFQGKTVG
PHPSLVQEFI DSTGYLFYMY TPDKFLQRAS IDLGINNIEL EKSAQEIRDL QKEDDLLQVI
FDETINSIWP EAKDSKPDIF GQSNTRKRII RPQSDSLPEQ PEFPWSETSF SKDGYKKSNS
HNARMGVMHE LKRLTAEKIE LEHFVTSSMR EGSLNSRDYS LLMIRLKKIE KEIQLMSGQV
NDNDPYSEI