Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1925 |
Symbol | |
ID | 3367435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2198097 |
End bp | 2199377 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637652271 |
Product | diaminobutyrate--2-oxoglutarate aminotransferase |
Protein accession | YP_235007 |
Protein GI | 66045166 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases [TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.234106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0160728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCAT CAATGGCTAT CTACGAGCGT GAGTCGAATG TGCGTTCTTA TTGTCGCGAC TGTGACGTTG TGTTTGCGAC GGCGCAAGGG GCAGTGATCG AAGACGTCGA GGGGCGGCAG TTCATCGATT TTTTTGCGGG GGCCGGATCA CTGAACTATG GCCACAATAA CCCGCGTTTG AAAAAAGAGC TGTTGGACTA TATTCAGCAG GACGGCATCA CGACCACCCT GGACTTTCAC AGCGCTGCGA AGTCTCGGTT TATCGAACAG TTCGAGCGGA TTATCCTCAC GCCGCGGGGG ATGAACTACA AACTGCAGTT CACCGGGCCC ACGGGGACCA ATGCAATCGA GGCCGCCTTG AAGCTGGCCC GCAAGATCAC CGGACGCACT TGCATCGCTG CGTTTACCCA TGCATTTCAC GGCGTCACGC TGGGCTCGCT GGCGCTGACC GCCAACGCCG ATAAAAGAGC CGTCTCTGGC GTAGAGCTGT CAAACGTCGT TCGGCTGCCT TATGACGGAT TTCTGGGGCG TGACATTGAC AGCGCGCATA TCATTGAAAC GATGTTCTCC TCAGCAGGCG CAGGTTTCGA GCCGCCGGCG GCCATTATTC TGGAAGTTGT GCAGGGCGAG GGCGGTTTGA ATTGCGCGCG GCCGCAATGG TTACAGAGAA TTCAACAGCT GTGCCGGGCC TCAGGTGCGC TACTGATCAT TGACGATATT CAAGCCGGTT GCGGTCGTAC GGGCACGTTT TTCAGCTTCG AATCTGCCGA TATATCCCCC GACATCATTT GCCTTTCAAA GTCCATCAGC GGTTATGGTC TGCCGATGTC ACTGGTGCTG ATAAAACCGG AGCACGATCA GTGGGCGCCC GGTGAACACA ATGGCACCTT CCGTGGAAAC AACACTGCAT TCGTGACGGC TGCGGCGGCA CTGAGCTATT GGCAAGACAA TGCGTTCGAG CGCTCGATAG CGCAACGGTC CGCCGTCCTG CGCCTTGCAC TGGAAAAAAT AATTGCTCAT TCACCCCCCG AGGCTGTCCG CATTGTCGGG AGAGGGCTGT TCATGGGATT GAGATTTGGC GACTCACGGC GCGCGAGCAG ACTGTCTGCA GAATGCCTGT CCCAAGGTCT GCTTGTGGAA ACCTGTGGCC CCTTGAATGA AGTGCTCAAG CTGATGCCGC CGCTGACCAT CGATCTGCCT GTACTAGAGC GCGGACTGGA CATCTTGAAA CGTGCCTACC TTTCTACCTT ACACAACGAG TCATCGCGAG GGATTGCCTG A
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Protein sequence | MNPSMAIYER ESNVRSYCRD CDVVFATAQG AVIEDVEGRQ FIDFFAGAGS LNYGHNNPRL KKELLDYIQQ DGITTTLDFH SAAKSRFIEQ FERIILTPRG MNYKLQFTGP TGTNAIEAAL KLARKITGRT CIAAFTHAFH GVTLGSLALT ANADKRAVSG VELSNVVRLP YDGFLGRDID SAHIIETMFS SAGAGFEPPA AIILEVVQGE GGLNCARPQW LQRIQQLCRA SGALLIIDDI QAGCGRTGTF FSFESADISP DIICLSKSIS GYGLPMSLVL IKPEHDQWAP GEHNGTFRGN NTAFVTAAAA LSYWQDNAFE RSIAQRSAVL RLALEKIIAH SPPEAVRIVG RGLFMGLRFG DSRRASRLSA ECLSQGLLVE TCGPLNEVLK LMPPLTIDLP VLERGLDILK RAYLSTLHNE SSRGIA
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