Gene Psyr_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1916 
Symbol 
ID3367426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2190664 
End bp2191107 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content59% 
IMG OID637652262 
Productpeptidase S24, S26A and S26B 
Protein accessionYP_234998 
Protein GI66045157 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00132247 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGTTA CCTTCCTTGG CCCGTTGTCG GCAGGGGGCA TCAAACTCCC GTTCATATCG 
CTGTCGTCCG TTGGCTCCAG ATCGCCAGTG GTCGAGAAGC ATGTTTCCAT CGCCGAGCTT
TGTGAGGTCC GTGAGCCACA CGCCTACCTG GCCAGGATCG AAGACCAAGG TATGCAGGGG
AGCGGCATGT GCAGCGGGGA TATGCTGGTG GTCGACCGCA GCCAGTACGC CGAGCACGGT
GACATCGTCG TTGCCTCGCT CAATGCACGG CAGATCTGCC GACGTTTGCA CATGCGCGGC
GATGTGGTGA TTCTGGAATC GCAAAACCCG GATTACCCAC CACTGCATGT CACCGACAAC
GATGACCTGA TCATCCTGGG CGTGGTGACC TACAGCCTGA AAAACCTGCT GGAGGGCCGC
GCTGCATCAT CAGCTCATCG ATGA
 
Protein sequence
MSVTFLGPLS AGGIKLPFIS LSSVGSRSPV VEKHVSIAEL CEVREPHAYL ARIEDQGMQG 
SGMCSGDMLV VDRSQYAEHG DIVVASLNAR QICRRLHMRG DVVILESQNP DYPPLHVTDN
DDLIILGVVT YSLKNLLEGR AASSAHR