Gene Psyr_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1873 
Symbol 
ID3367382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2148483 
End bp2149211 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content57% 
IMG OID637652221 
Productamidotransferase 
Protein accessionYP_234958 
Protein GI66045117 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAC GCATCTGTAT TCTGGAAACC GACAATCTGC GACCTGAACT GGTCGAGCAG 
TATCATGGGT ATGGGCGGAT GTTCGAATTA CTCTTCGCTC GCCAGCCCAT CGCCGCAGAG
CTGACGGTTT ACAACGTGGT GCAAGGGGAC TATCCACCTG CAGACGAGCA GTTCGATGCT
TACCTGGTGA CCGGCAGCAA GGCCGACTCA TTTGGTACCG ACCCCTGGAT TCAAACCTTG
AAGGTCTATC TGCTGGAACT GTATCAGCGC GGCGAAAAAC TGCTGGGTAT CTGTTTCGGT
CATCAGTTGC TGGCGTTGCT GCTGGGCGGC AGGACCGAGC GTGCGGTGCA AGGGTGGGGC
GTCGGCATTC ACCATTATCA ACTGGCCCCC GCCAGGCCGT GGATGACGCC GGCGATGGAC
AAGCTCACGC TGCTGATCAG CCATCAGGAT CAGGTGACTG CGCTGCCCGA AAACGCGACG
GTGCTTGCGT CCAGCGAGTT CTGCCCGTTT GCGGCCTACC ATATCAATGA TCAGGTGCTG
TGTTTCCAGG GGCATCCCGA GTTCATCCAT GACTTTTCCC GCACCTTGCT TGACCTTCGT
CAGGAAGCGC TGGGCGAGCA GATTTACAAG CAGGGTGTCG CCAGCCTGGA TCACGACCAT
CATGGTGCGA CAGTGGCGGA ATGGATGATG CGCTTCGTGG CGCATAAACC GGAAAAACAG
TCCGTCTGA
 
Protein sequence
MSLRICILET DNLRPELVEQ YHGYGRMFEL LFARQPIAAE LTVYNVVQGD YPPADEQFDA 
YLVTGSKADS FGTDPWIQTL KVYLLELYQR GEKLLGICFG HQLLALLLGG RTERAVQGWG
VGIHHYQLAP ARPWMTPAMD KLTLLISHQD QVTALPENAT VLASSEFCPF AAYHINDQVL
CFQGHPEFIH DFSRTLLDLR QEALGEQIYK QGVASLDHDH HGATVAEWMM RFVAHKPEKQ
SV