Gene Psyr_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1802 
Symbol 
ID3367310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2075718 
End bp2076224 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content58% 
IMG OID637652150 
Productregulatory proteins, AsnC/Lrp 
Protein accessionYP_234887 
Protein GI66045046 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.596593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.185303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA TAAATGAACG CACTAAAAAG TCCGGTGCTG ATGTAACGCC GCTGCTGGAC 
AGGATTGACC GCGCCATCCT CAAGACCTTG CAACGTGACG CGTCCATTTC CAATGTGGCA
CTTGCCGAGA AGGTCAAACT GAGTCCGCCT GCGTGCCTGC GGCGCGTCGA GCGGCTGAAA
GAGGCGGGCG TGATCAAGGG CGTGGTGGCG CTGCTCAATG GCGATGTTCT GGACGCGGGC
ATGGTGGTGC TGATCGGTGT CGTGCTGGAC CGCTCGACAC CGGATTCATT TGCCCAGTTT
GAAGCCGCCG CGCAGAAGGT TTCCGGCTGC ATGGAGTTTC ATGTCGTCAC CGGCGAGTTC
GACTACTTCA TGTTGCTGCG CACCCGGGAC AGTCAAAGCT TCAACCGCCT GCACGCTGAA
CAGTTACTGT ACTTGCCCGG TGTCAGGCAG ATCCGTTCGT TCATGGGGCT GCGTCAGGTC
GTTTCCACGA CACAATTACC TCTCTGA
 
Protein sequence
MKAINERTKK SGADVTPLLD RIDRAILKTL QRDASISNVA LAEKVKLSPP ACLRRVERLK 
EAGVIKGVVA LLNGDVLDAG MVVLIGVVLD RSTPDSFAQF EAAAQKVSGC MEFHVVTGEF
DYFMLLRTRD SQSFNRLHAE QLLYLPGVRQ IRSFMGLRQV VSTTQLPL