Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1769 |
Symbol | |
ID | 3367277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2013029 |
End bp | 2014180 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652118 |
Product | Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal |
Protein accession | YP_234855 |
Protein GI | 66045014 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGACC TTGAATTGAG TGAAGAGCAG GTAATGATTC GCGACATGGC GCGCGACTTT GCGCGTAATG AAATCGCGCC GTATGCCCAG GCCTGGGAAA AGGCCGGCTG GATCGATGAC GCACTGGTTG CCAAGCTCGG CGAACTGGGC CTGCTGGGCA TGGTGGTGCC GGAGCAATGG GGTGGCACCT ACATCGATTA CGTCGCCTAC GCCCTGGCGG TTGAGGAAAT CTCCGCTGCC GACGCGGCCA CCGGCACATT GATGAGCGTT CACAGCTCGG TGGGCTGCGG GCCGGTTCTC AACTACGGCA CCGACGAGCA GAAACATGCC TGGCTGGAAA AACTGGCCAC GGGCCGGGCC ATCGGCTGTT TCTGCCTGAC CGAACCACAT GCAGGCTCTG AAGCCCACAA CCTGCGGACT CGTGCCGAGT TACAGGGCGA TGAGTGGGTG ATCAACGGCG CCAAGCAGTT CGTCAGCAAC GGCAAGCGGG CACAACTGGC TATCGTGTTT GCGGTGACCG ATCCGGCGCT TGGCAAAAAG GGCCTGTCAG CCTTTCTGGT GCCGACCGAA AACCCCGGTT TCGTGGTGGA TCGCAGCGAA CACAAGATGG GCATCCGCGC ATCGGACACC TGCGCGGTCA CCTTGAACAA CTGCCGCATC CCGGCTGCCA ACCTGCTGGG TGAGCGCGGC AAGGGCCTGT CGATCGCCCT CTCCAACCTG GAAGGCGGCC GCATCGGCAT CGCCGCGCAG GCGCTGGGTA TCGCCCGCGC CGCCTTCGAA GCTGCGCTGG CGTATGCGCG GGAACGTGTG CAGTTCGACA AACCGATCAT CGAACATCAA AGCATTGCCA ATCTGCTGGC CGACATGCAC ACCCGCATCA ATGCCGCCCG CCTGCTGACC CTGCACGCCG CGCGGCTGCG CAGCGCCGGG CAAGCGTGCC TGTCGGAAGC CTCTCAAGCC AAGCTGTTCG CGTCGGAAAT GGCCGAATGG GTGTGCTCCA AGGCGATCCA GATTCATGGT GGCTATGGCT ATCTGGAGGA CTACCCGGTC GAGCGTTACT ACCGGGACGC GCGCATCACC CAGATATACG AAGGCTCCAG CGAGATCCAG CGCCTGTTGA TCGCCCGTGA ATTGCGCCAT TATCTGGTCT GA
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Protein sequence | MHDLELSEEQ VMIRDMARDF ARNEIAPYAQ AWEKAGWIDD ALVAKLGELG LLGMVVPEQW GGTYIDYVAY ALAVEEISAA DAATGTLMSV HSSVGCGPVL NYGTDEQKHA WLEKLATGRA IGCFCLTEPH AGSEAHNLRT RAELQGDEWV INGAKQFVSN GKRAQLAIVF AVTDPALGKK GLSAFLVPTE NPGFVVDRSE HKMGIRASDT CAVTLNNCRI PAANLLGERG KGLSIALSNL EGGRIGIAAQ ALGIARAAFE AALAYARERV QFDKPIIEHQ SIANLLADMH TRINAARLLT LHAARLRSAG QACLSEASQA KLFASEMAEW VCSKAIQIHG GYGYLEDYPV ERYYRDARIT QIYEGSSEIQ RLLIARELRH YLV
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