| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1760 |
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| Symbol | |
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| ID | 3367268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2001324 |
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| End bp | 2002928 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652109 |
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| Product | peptidoglycan-binding LysM:SLT:MLTD_N |
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| Protein accession | YP_234846 |
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| Protein GI | 66045005 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.721447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCAT CTACCAGCAA GCCTTCACAT TCGGACGCAT TGACTCGGTT GGCTCAGGCC
ATGGCCGTCA CCGCGAGTGC CCTTCTGGCC GGTTGCCAGA GCACCGCCAG CGTCGACCCG
GCCAGTAATC ATCGCGCGCC TAACCTGGCC GCCGGAATCA AGCAAAAACC GATTTTTCTG
TCACACAAGC CTGCCACCCC TCTCGCACCT CCACAGGATG TCTGGGAGCG CATGCGTCAG
GGCTTTCAAC TGCAACAAGG CAACGATCAG AACCCCCGCA TCGATCAACA GCGCCTGTGG
TTCGCCAACA ACCCTTCCTT TCTGGAAAAC GCTGGCGAGC GCGGCAGCCT GTACATGCAC
TACATCGTCG AGCGCCTTGA AGAACGCAAC ATGCCGCTGG AACTGGCCCT GCTTCCGGTT
ATCGAAAGCG CCTACAACCC GATGGCCGTT TCACGCAGCC AGGCGGTCGG CCTCTGGCAG
TTCATCCCGT CGACCGGGCG TTACTTCAAC CTGCGCCAGA CCAGCTTTTA TGACGGACGT
CGCGACATCC AGGCCTCGAC TGTTGCGGCA CTGGATTACC TGACCCGCCT GCACGACATG
TTCAACGGTG ACTGGCTGCT GGCCCTGGCA GCCTACAATG CCGGCGAAGG CACGGTGAGC
CGCGCCATCG AGCGCAATGA CAAGCTCAAC CTGCCGACCG ACTACTGGAA CCTGCCGCTG
CCGCAGGAAA CCCGCGATTA CGTGCCCAAG CTGCTGGCCC TGTCCCAGGT TGTATTGTCG
CCGGAAGCTT ATGGCGTCAA TCTGAACCCG ATCGCCAACC AGCCTTACTT CGAAGTCGTC
GAGCTCAACA AGCGTGTCGA CCTGTCCAAA GTGGCCAGCG CCGCCGACAT CGACGAAGAC
GAGCTTATCC AGCTCAACCC CGCCTACAAG AAGCGCCTGA CCGTCGATGG CCCCCAGCAC
CTGCTGGTGC CCACCTCCAA GGCGCAACTG CTGACGGCCA GCCTGCTGAC CATGAAACAG
GAAGAGCTCG TCGCCTGGCA GCCTTACCGG GTGCGCAAGG GCGACACTCT GGAAAGCCTG
GCAAGTCGTT ATCAGGTCAC GGTCAGCTCG CTCAAGGGCA ATAACAAGCT GTCCGGCAAC
CGCCTGAAGG TCGGTCAGTC GCTGAGCATA CCGGTCAAGC CGGGCATGCA GAATTCACAG
CCTGTGTTCG AAGCGCTGGC CAGCAACGAC AAGCCGTCAC GTACCCGCAG CTACAAAGTG
CGCAGCGGTG ACAACCTGAC CAACATCGCG CAAGCCAACA AGGTTGACGT CGAAGACCTG
CAACGCTGGA ACAAGCTGAC CGGCAAGAAG CTCAAGGTCG GCCAGACGCT GGTCATGCAG
GACACCAGCA AACCTGCCGG TAAAGCCGCC AGCAAGGCGG TCGCCAGCAC CAGCGCCAAG
GATGGCGAAA AGAAATCCAT GCAGTACAAG ATCCAGAAAG GTGACTCGAT GTACCTGGTC
GCCAAGCGCT TCAACGTCGA GATGCAACAT CTCAAGCGCT GGAATCCACG TAGCGGGCAG
GCCCTCAAAC CCGGCCAGAC CCTGACCGTT TACCTGCCAC ATTGA
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| Protein sequence | MSSSTSKPSH SDALTRLAQA MAVTASALLA GCQSTASVDP ASNHRAPNLA AGIKQKPIFL
SHKPATPLAP PQDVWERMRQ GFQLQQGNDQ NPRIDQQRLW FANNPSFLEN AGERGSLYMH
YIVERLEERN MPLELALLPV IESAYNPMAV SRSQAVGLWQ FIPSTGRYFN LRQTSFYDGR
RDIQASTVAA LDYLTRLHDM FNGDWLLALA AYNAGEGTVS RAIERNDKLN LPTDYWNLPL
PQETRDYVPK LLALSQVVLS PEAYGVNLNP IANQPYFEVV ELNKRVDLSK VASAADIDED
ELIQLNPAYK KRLTVDGPQH LLVPTSKAQL LTASLLTMKQ EELVAWQPYR VRKGDTLESL
ASRYQVTVSS LKGNNKLSGN RLKVGQSLSI PVKPGMQNSQ PVFEALASND KPSRTRSYKV
RSGDNLTNIA QANKVDVEDL QRWNKLTGKK LKVGQTLVMQ DTSKPAGKAA SKAVASTSAK
DGEKKSMQYK IQKGDSMYLV AKRFNVEMQH LKRWNPRSGQ ALKPGQTLTV YLPH
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