| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1748 |
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| Symbol | clpX |
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| ID | 3367256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1985531 |
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| End bp | 1986814 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637652097 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_234834 |
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| Protein GI | 66044993 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.816527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0640617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGACA CCCGCAACGG CGAGGACAAC GGCAAATTGC TCTATTGCTC CTTCTGTGGC
AAAAGCCAGC ATGAAGTGCG CAAATTGATT GCCGGCCCCT CGGTCTTTAT CTGCGACGAG
TGCGTCGACC TGTGCAATGA CATCATCCGT GAGGAGGTGC AGGAAGCCCA GGCCGAAAGC
AGCGCGCATA AATTGCCTTC GCCCAAAGAA ATCAGCGGCA TCCTTGACCA GTACGTAATC
GGTCAGGAAC GTGCCAAGAA GGTTCTCGCA GTAGCGGTGT ACAACCACTA CAAGCGTCTG
AACCAGCGTG ACAAGAAGAA CGACGATGTG GAGTTGGGCA AGAGCAACAT CCTGCTGATC
GGCCCTACGG GCTCCGGCAA GACGCTGCTG GCCGAAACAC TGGCCCGCCT GCTCAACGTA
CCGTTCACCA TCGCTGACGC CACCACCCTG ACCGAAGCCG GTTATGTGGG TGAGGACGTC
GAAAACATTA TCCAGAAGCT GTTGCAGAAA TGTGATTACG ATGTAGAGAA GGCCCAGATG
GGTATTGTCT ACATCGACGA AATCGACAAG ATCTCGCGCA AATCCGACAA CCCTTCGATC
ACTCGTGACG TGTCCGGTGA AGGCGTGCAG CAAGCCTTGC TGAAACTGAT CGAGGGCACC
GTGGCTTCCG TTCCGCCGCA AGGTGGTCGC AAGCACCCGC AGCAGGAATT CCTGCAGGTG
GACACGCGTA ATATCCTCTT TATCTGCGGT GGCGCCTTCT CGGGCCTGGA AAAGGTCATT
CAGAACCGTT CCACCCGTGG CGGCATCGGC TTCAACGCCG AGGTTCGCAG CAAGGAGGAG
GGCAAGAAGG TTGGCGAGTC GCTGCGTGAA GTCGAGCCTG ACGATCTGGT CAAGTTCGGT
CTGATCCCCG AGTTCGTGGG CCGTCTGCCG GTGCTGGCAA CGCTGGACGA GCTGGATGAG
GCTGCTTTGA TACAGATCCT CACCGAGCCG AAGAACGCAC TGACCAAGCA GTATGCCAAG
CTGTTCGAGA TGGAAGGTGT GGACCTCGAG TTCCGGACCG ATGCGCTGAA ATCGGTCGCC
CGTCGCGCGC TGGAGCGCAA GACCGGTGCC CGTGGCCTGC GTTCGATTCT GGAAGGCGTG
CTGCTCGACA CCATGTATGA AATCCCGTCG CAGAGCGATG TGAGCAAGGT GGTGATCGAC
GAAAGCGTCA TCGATGGCAC GTCCAAGCCG CTGTTGATAT ACGAAAACAG CGAGCCGCCT
GCCAAGGTTG CTCCCGACGC ATAA
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| Protein sequence | MTDTRNGEDN GKLLYCSFCG KSQHEVRKLI AGPSVFICDE CVDLCNDIIR EEVQEAQAES
SAHKLPSPKE ISGILDQYVI GQERAKKVLA VAVYNHYKRL NQRDKKNDDV ELGKSNILLI
GPTGSGKTLL AETLARLLNV PFTIADATTL TEAGYVGEDV ENIIQKLLQK CDYDVEKAQM
GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLIEGT VASVPPQGGR KHPQQEFLQV
DTRNILFICG GAFSGLEKVI QNRSTRGGIG FNAEVRSKEE GKKVGESLRE VEPDDLVKFG
LIPEFVGRLP VLATLDELDE AALIQILTEP KNALTKQYAK LFEMEGVDLE FRTDALKSVA
RRALERKTGA RGLRSILEGV LLDTMYEIPS QSDVSKVVID ESVIDGTSKP LLIYENSEPP
AKVAPDA
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