Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1736 |
Symbol | |
ID | 3367241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1971971 |
End bp | 1973824 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652082 |
Product | helix-turn-helix, Fis-type |
Protein accession | YP_234822 |
Protein GI | 66044981 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.590224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAA CCAGCGCTTC GCTTGCTCAC GACATCATCA TTCAGGATTC ATGGACCCGC TGCCGGGACT TCGGCCTCAG TCATCAGACG CGTCCCTCAT TCGGCCAATT GCCGGGGACG GAGGTTTCCA GGCTGCTGGA GCGCCATCAC GGACTGGTAC AGACCACCCA TCAGGAGGTC CTGCCGGTCT ACGAAAACAT TCTCAGCAAC TCCAGCTGTC TGATTCTGCT GGCCGACCGT CAAGGTCAGT TGCTCAAGTC ATGGGGTGCA CAACGCTTCG TCGAATCGTC CCAGGCTCAA GGCTTCATGC CAGGTGCCAG CTGGAACGAA CGCGGCACGG GCACCAACGC CATCGGCACG GCGCTGGCCT GCGAAGAGGC CATCCATATT GAACCGGACG AGCATTTCCT CAAGGCCAAC CGTTTCATGA CCGGTTCGGC CTCACCGATC TTCGACGCAG ACAGGCGCAT CATCGCCGTG CTGGATGTGT CCAGCGACAG CTTCCTGCCA CCCTCGCACA CGCTGGGCAT GGTCAAAATG ATGAGCCAGT CGGTGGAAAA CCGCCTGATC CTCGACCAGT TTCGCGACTC CCATTTCCAG CTGATCTTCA ATACCGGCCT GAACAACCTC GACAGCCAAT GGGCTGGCCT GCTGATTTTT GACGAAAGTG GCCAGATCCT GTGCGCCAAT CGGCGCGCCG ACACCTTGCT GGGGACGGCT CCGGCCGGTG CCAGCATCGA GACGCTGTTC AAATGTCCGA TCCTGCAATT GCTCAGCGAA ACCGAAGCGC GTCCGTTTGC GCTGCATGCA TTTGGCAACA ATCGCTTTCA ATGCCTGCTC AAGCGTCCGA CTCGCAAACC ATTGAAGCTG CATTGCGTCC AGGCTGCGCA GGTGCCTGCT GCACCACGAA ACCTTGATCT GCAGGCGATC AGCTTGGGCG ATGCGAAGGT CGAGAAGGCT GTGCGTCAGG CGCAGCGGCT GCTGGAAAAA GACATCCCAC TGCTCATTCA TGGTGAAACC GGGGTTGGCA AGGAAGTCTT TGTCAAAGCC CTGCATCAGG CCAGTGCGCG CGCCAGCCAG CCGCTGATCG CGGTCAACTG TGCAGCGATC CCGGCCGATC TGGTCGAGGC CGAGCTGTTT GGCTATGAAA GAGGCGCCTT CACCGGGGCC AACCAGAAAG GCAGCATCGG CCTGATCCGC AAGGCCGACA AAGGCACGCT GTTTCTGGAT GAGGTGGGCG ACATGCCGAT GCCGGTACAG GCGCGATTGC TGCGTGTGCT GCAAGAGCGC TGCGTTCAGC CATTGGGCAG CAGCGAGCTG TATCCGGTCG ATATACGGCT GATTTCAGCC ACCAACCGGG GTCTGCGCGA TCAGGTCCAG GCGGGGCTTT TTCGCCAGGA TCTTTATTAT CGGATCAGCG GCCTGAGCAT CGAACTCCCG CCCCTCCGCG AGCGGACTGA CAAACATGCG CTGATCCAGC GAATCTGGGA GCGGCACCGT GATGCTCACC AGCGCGCGGG CTTTTCCAGA GAAGTGCTTG AATTATTCGA GCATCACCCC TGGCCGGGCA ACCTGCGCCA GCTCAACAGC GTGATTCAGG TAGCGCTGGC ACTGGCCGAC GAACAGCCGA TCGGCACCGA CCATCTGCCC GAGGACTTTC TGCTCGACGC TCACGCGGAT GAGGAATGCC GTGTCCCGCT CAGGACTCAG GAGTCGGCCA CTCGCTTTCA CTCGAGCGAA GACCTCGGCC AACTGTTTCA AGCGGCAGGC GGGAATGTTT CACAGTTGGC CAAACGTCTG GGCGTCAGCC GCAACACACT GTACAAGCGG TTGCGGGAAC AGCGGATCGT TTAG
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Protein sequence | MSQTSASLAH DIIIQDSWTR CRDFGLSHQT RPSFGQLPGT EVSRLLERHH GLVQTTHQEV LPVYENILSN SSCLILLADR QGQLLKSWGA QRFVESSQAQ GFMPGASWNE RGTGTNAIGT ALACEEAIHI EPDEHFLKAN RFMTGSASPI FDADRRIIAV LDVSSDSFLP PSHTLGMVKM MSQSVENRLI LDQFRDSHFQ LIFNTGLNNL DSQWAGLLIF DESGQILCAN RRADTLLGTA PAGASIETLF KCPILQLLSE TEARPFALHA FGNNRFQCLL KRPTRKPLKL HCVQAAQVPA APRNLDLQAI SLGDAKVEKA VRQAQRLLEK DIPLLIHGET GVGKEVFVKA LHQASARASQ PLIAVNCAAI PADLVEAELF GYERGAFTGA NQKGSIGLIR KADKGTLFLD EVGDMPMPVQ ARLLRVLQER CVQPLGSSEL YPVDIRLISA TNRGLRDQVQ AGLFRQDLYY RISGLSIELP PLRERTDKHA LIQRIWERHR DAHQRAGFSR EVLELFEHHP WPGNLRQLNS VIQVALALAD EQPIGTDHLP EDFLLDAHAD EECRVPLRTQ ESATRFHSSE DLGQLFQAAG GNVSQLAKRL GVSRNTLYKR LREQRIV
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