Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1707 |
Symbol | |
ID | 3367212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1932068 |
End bp | 1932781 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637652053 |
Product | transcriptional regulator GntR |
Protein accession | YP_234793 |
Protein GI | 66044952 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0401914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.758482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTATC GAAAGCCTTC CGACCGAAAA AGCATGCACG CCCGTATTGT CCAGGAACTG GGCATGCAAA TCGTGTCCGG CCGTTTCAAG CCTGACGAAA AGCTGCCTGC CGAAGCGATG CTCTGCGAAG AGTATGCCGT CAGCCGCCCG GTCCTGCGTG AAGCCACGCG GGTTCTGGTG GCCAAGGGTC TGGTTTATTC GCGGCCGCGT GTCGGCACGG TGGTCAAGGC GCGTCGCGAA TGGCATCTGC TGGACCCGGA CGTACTGCAC TGGGTCATGC AAAGCTCGCC GCAGAATGAT TTCTTCAATC TGCTGACCAG CGTACGCGCT GTCATCGAAC CAGCAGTTGC AGCACTGGCC GCGCAGCATG CCACCGACGC AGAGATCGAG TCGATCCACG AAGCCTACCT GCGCATGGAA GCCGCACCGA CGCCGGAAGA CCTGCTGCAA CCCGATCTCG ACTTCCACAG CCGCATCGCC GACGCCACCC ACAACGACTT GCTGGCTCAC CTGTGCAACA TGCTGTCACT GGCGTTGCGC GAAGCGCTCA AATACTCCAA CAAGCGTCCC AACCTGCACG AACTGGCCAT GCCGCGTCAC AAGGCGATCC TCACCGCCAT CCAGAACCGC GACGCGCTGG GCGCACGCCA CGCCTCGCTG GTGCAACTGG ACGATGCACG CAACGCGCTG AGTGTGGTGC TCGGCGGAGG CTGA
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Protein sequence | MDYRKPSDRK SMHARIVQEL GMQIVSGRFK PDEKLPAEAM LCEEYAVSRP VLREATRVLV AKGLVYSRPR VGTVVKARRE WHLLDPDVLH WVMQSSPQND FFNLLTSVRA VIEPAVAALA AQHATDAEIE SIHEAYLRME AAPTPEDLLQ PDLDFHSRIA DATHNDLLAH LCNMLSLALR EALKYSNKRP NLHELAMPRH KAILTAIQNR DALGARHASL VQLDDARNAL SVVLGGG
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