Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1679 |
Symbol | |
ID | 3367184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1887619 |
End bp | 1887960 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637652025 |
Product | hypothetical protein |
Protein accession | YP_234765 |
Protein GI | 66044924 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00169445 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTCG TGACGCTCTG CGTCACACAG CAGTTCTGCG ACATCAGCTG GATTGACGTT CGGCTCAGGT CACCTTTTCG CCCCTCGGCG ACCTACTTTG ATGGGGCCAA AGTAGGCAAA ACCCCTCGCT CCGGTTTCCG GCCCGACTTC GTCGGGTTCC TTCGCCCTGT CACTGATCCG GGGGTCGCCG CAACGCGCCA TCCATGGCGC GGTGCGGCTA GCCTGGCGTC CTGCCAGGCT ACCCCGGATC AGCGCCAGGA CTCAGCCGTC ACTAACGTCG CACTCTGCGT CGTCAGTGAC ATCGCGGTTG AAAAGCGCTT TTGCGCCAGT GGCTGCGCGT AA
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Protein sequence | MPFVTLCVTQ QFCDISWIDV RLRSPFRPSA TYFDGAKVGK TPRSGFRPDF VGFLRPVTDP GVAATRHPWR GAASLASCQA TPDQRQDSAV TNVALCVVSD IAVEKRFCAS GCA
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