Gene Psyr_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1679 
Symbol 
ID3367184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1887619 
End bp1887960 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content63% 
IMG OID637652025 
Producthypothetical protein 
Protein accessionYP_234765 
Protein GI66044924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00169445 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTCG TGACGCTCTG CGTCACACAG CAGTTCTGCG ACATCAGCTG GATTGACGTT 
CGGCTCAGGT CACCTTTTCG CCCCTCGGCG ACCTACTTTG ATGGGGCCAA AGTAGGCAAA
ACCCCTCGCT CCGGTTTCCG GCCCGACTTC GTCGGGTTCC TTCGCCCTGT CACTGATCCG
GGGGTCGCCG CAACGCGCCA TCCATGGCGC GGTGCGGCTA GCCTGGCGTC CTGCCAGGCT
ACCCCGGATC AGCGCCAGGA CTCAGCCGTC ACTAACGTCG CACTCTGCGT CGTCAGTGAC
ATCGCGGTTG AAAAGCGCTT TTGCGCCAGT GGCTGCGCGT AA
 
Protein sequence
MPFVTLCVTQ QFCDISWIDV RLRSPFRPSA TYFDGAKVGK TPRSGFRPDF VGFLRPVTDP 
GVAATRHPWR GAASLASCQA TPDQRQDSAV TNVALCVVSD IAVEKRFCAS GCA