| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1645 |
|---|
| Symbol | |
|---|
| ID | 3367147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1850448 |
|---|
| End bp | 1851440 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637651988 |
|---|
| Product | putative glycerol-3-phosphate acyltransferase PlsX |
|---|
| Protein accession | YP_234731 |
|---|
| Protein GI | 66044890 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.129907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.196168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGGG ACTTCGGTCC CCGCAACATT GTTCAGGCAA GCCTCGCGTG CCTGACAGCT
ACTCCCTCGC TTCACCTGGC CCTTGTCGGC CAAGCCTCCC TTATTGAAGA ACTCGTCTCT
GCTCATGAAG CCGTGGATCG TTCGCGCCTG CGTGTCATTC ATGCCAGTGA AGCGATTGCG
ATGGACGAGC GTCCGTCTCA GGCGTTGCGT GGCAAGCCTG ACTCTTCCAT GCGCGTTGCT
CTCGAGCTGG TGGCCAGCGG TCAGGCCCAG GCATGTGTCA GTGCCGGCAA TACCGGTGCG
CTGATGGCGC TTTCCCGGTT TGTGCTCAAG ACCTTGCCAG GGATCGACCG CCCGGCAATG
ATCGCAGCCA TTCCCACTCG CTCGGGTCAT TGCCAGTTAC TGGACCTGGG GGCGAACGTC
GATTGCAGCG CCGAGGCGCT CTATCAGTTT GCAGTGATGG GCTCGGTGCT TGCCGAGATC
CTTGGTGTCG CAACGCCCAG AGTGGCCTTG CTCAATGTGG GCACTGAAGA CATCAAGGGC
AATCAGCAGG TCAAGCGTGC TGCCGGTCTT TTACAGGCTG CCTCGGGGCT TAACTACATT
GGCTATGTCG AAGGCGACGG GTTGTACCGG GGAGAGGCTG ACGTGGTGGT GTGTGACGGT
TTCGTCGGCA ACGTGTTGCT CAAGTCGAGT GAGGGGCTGG CGACCATGAT TGCGGCCAGA
ATCGAGACGC TGTTCCAGCG CAATCTGCTC AGCAGAGCGG TCGGCGCGCT GGCGTTGCCC
TTGTTGAAGC GTTTGCAGAC CGACCTGGCG CCCGCCCGTC ATAATGGTGC GAGCCTGCTC
GGATTACAGG GGGTCGTGGT GAAAAGCCAC GGTTCTGCAA GTGTTTCAGG TTTTCAGAGT
GCGATTCAGC GAGCGGTCGT CGAATCCCGT GAAAACCTGC CACAGCGTTT GAAGGGGCGG
CTTGAAACGA TGTTTCAGGA CGGCCGAACC TGA
|
|---|
| Protein sequence | MGGDFGPRNI VQASLACLTA TPSLHLALVG QASLIEELVS AHEAVDRSRL RVIHASEAIA
MDERPSQALR GKPDSSMRVA LELVASGQAQ ACVSAGNTGA LMALSRFVLK TLPGIDRPAM
IAAIPTRSGH CQLLDLGANV DCSAEALYQF AVMGSVLAEI LGVATPRVAL LNVGTEDIKG
NQQVKRAAGL LQAASGLNYI GYVEGDGLYR GEADVVVCDG FVGNVLLKSS EGLATMIAAR
IETLFQRNLL SRAVGALALP LLKRLQTDLA PARHNGASLL GLQGVVVKSH GSASVSGFQS
AIQRAVVESR ENLPQRLKGR LETMFQDGRT
|
|---|
| |