Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1630 |
Symbol | |
ID | 3367132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1833861 |
End bp | 1834793 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637651973 |
Product | ABC transporter |
Protein accession | YP_234716 |
Protein GI | 66044875 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0229972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCG CTCTGTCCAT TCGGCAGTTA ACCAAAACCT ACGGCAACGG TTTCCAGGCC TTGAATGGCA TCGATCTGGA CGTCGCCGAA GGTGATTTCT TCGCCTTGCT GGGCCCCAAT GGCGCTGGCA AATCCACCAC CATCGGCATC ATCTCGACGC TGGTCAACAA GACCAGTGGC ACGGTGAACA TCTTTGGTCA CGACCTGGAT CGCGAGCCCG CTGCGCTCAA ACGGTGCATC GGTGTCGTGC CGCAGGAGTT CAACTTCAAC CAGTTCGAGA AGACCCTCGA CATCGTCGTC ACTCAGGCGG GCTACTACGG CATCCCGGCG AAAATCGCCA AGGAACGCGC CGAGCAGTAC CTGACGCAGC TGGGGCTGTG GGAAAAGCGC GATGTGCCTT CGCGTTCACT GTCCGGCGGC ATGAAGCGGC GCCTGATGAT CGCCCGTGCG CTGATTCACG AGCCGCGCCT GCTGATCCTC GACGAACCCA CCGCAGGTGT GGACATCGAG TTACGCCGTT CGATGTGGAC CTTTCTCACC GAGCTGAACA GCAAAGGCAT CACCATCATC CTCACCACGC ACTACCTGGA AGAGGCTGAA CAGCTGTGCC GCAACATCGG CATCATCGAC CACGGGGTGA TCGTGCAGAA CACCGGCATG AAGCAGCTGC TCAGCACGTT GACCGTTGAG ACGTTCGTGC TCGATCTCAA GGCCTCCTGG CAGAGCGCGC CACAATTGCC CGGTTTCCCT TGCCGCCTCC TCGACAGCCA CACCCTGGAA GTGCAGGTCG ACAAGAACGT CGGCATCACG GCACTGTTCA GTCAGCTCGC CTTCCAGAAC ATCGAAGTCT TGAGCCTGCG TAATAAATCC AATCGCCTTG AGGAGTTGTT TGTGTCCCTG GTGGAAAAAA ACCTCGCGAA GGTGGCGGTA TGA
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Protein sequence | MSSALSIRQL TKTYGNGFQA LNGIDLDVAE GDFFALLGPN GAGKSTTIGI ISTLVNKTSG TVNIFGHDLD REPAALKRCI GVVPQEFNFN QFEKTLDIVV TQAGYYGIPA KIAKERAEQY LTQLGLWEKR DVPSRSLSGG MKRRLMIARA LIHEPRLLIL DEPTAGVDIE LRRSMWTFLT ELNSKGITII LTTHYLEEAE QLCRNIGIID HGVIVQNTGM KQLLSTLTVE TFVLDLKASW QSAPQLPGFP CRLLDSHTLE VQVDKNVGIT ALFSQLAFQN IEVLSLRNKS NRLEELFVSL VEKNLAKVAV
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