Gene Psyr_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1630 
Symbol 
ID3367132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1833861 
End bp1834793 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content59% 
IMG OID637651973 
ProductABC transporter 
Protein accessionYP_234716 
Protein GI66044875 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0229972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCG CTCTGTCCAT TCGGCAGTTA ACCAAAACCT ACGGCAACGG TTTCCAGGCC 
TTGAATGGCA TCGATCTGGA CGTCGCCGAA GGTGATTTCT TCGCCTTGCT GGGCCCCAAT
GGCGCTGGCA AATCCACCAC CATCGGCATC ATCTCGACGC TGGTCAACAA GACCAGTGGC
ACGGTGAACA TCTTTGGTCA CGACCTGGAT CGCGAGCCCG CTGCGCTCAA ACGGTGCATC
GGTGTCGTGC CGCAGGAGTT CAACTTCAAC CAGTTCGAGA AGACCCTCGA CATCGTCGTC
ACTCAGGCGG GCTACTACGG CATCCCGGCG AAAATCGCCA AGGAACGCGC CGAGCAGTAC
CTGACGCAGC TGGGGCTGTG GGAAAAGCGC GATGTGCCTT CGCGTTCACT GTCCGGCGGC
ATGAAGCGGC GCCTGATGAT CGCCCGTGCG CTGATTCACG AGCCGCGCCT GCTGATCCTC
GACGAACCCA CCGCAGGTGT GGACATCGAG TTACGCCGTT CGATGTGGAC CTTTCTCACC
GAGCTGAACA GCAAAGGCAT CACCATCATC CTCACCACGC ACTACCTGGA AGAGGCTGAA
CAGCTGTGCC GCAACATCGG CATCATCGAC CACGGGGTGA TCGTGCAGAA CACCGGCATG
AAGCAGCTGC TCAGCACGTT GACCGTTGAG ACGTTCGTGC TCGATCTCAA GGCCTCCTGG
CAGAGCGCGC CACAATTGCC CGGTTTCCCT TGCCGCCTCC TCGACAGCCA CACCCTGGAA
GTGCAGGTCG ACAAGAACGT CGGCATCACG GCACTGTTCA GTCAGCTCGC CTTCCAGAAC
ATCGAAGTCT TGAGCCTGCG TAATAAATCC AATCGCCTTG AGGAGTTGTT TGTGTCCCTG
GTGGAAAAAA ACCTCGCGAA GGTGGCGGTA TGA
 
Protein sequence
MSSALSIRQL TKTYGNGFQA LNGIDLDVAE GDFFALLGPN GAGKSTTIGI ISTLVNKTSG 
TVNIFGHDLD REPAALKRCI GVVPQEFNFN QFEKTLDIVV TQAGYYGIPA KIAKERAEQY
LTQLGLWEKR DVPSRSLSGG MKRRLMIARA LIHEPRLLIL DEPTAGVDIE LRRSMWTFLT
ELNSKGITII LTTHYLEEAE QLCRNIGIID HGVIVQNTGM KQLLSTLTVE TFVLDLKASW
QSAPQLPGFP CRLLDSHTLE VQVDKNVGIT ALFSQLAFQN IEVLSLRNKS NRLEELFVSL
VEKNLAKVAV