| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1585 |
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| Symbol | |
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| ID | 3367085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1779987 |
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| End bp | 1783463 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637651926 |
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| Product | response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal |
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| Protein accession | YP_234671 |
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| Protein GI | 66044830 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.484303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGT CCAGCGGGCT GATTGCGGCC GTTGCCCTTA CCTATATGGC CATCATGTTC
GCCATCGCCT TCTACGGCGA CCGCTACAGC GCATCCCTGC GCCCGACCAT GCGTGCCTGG
GTCTACAGCC TGTCGCTGGC GGTGTACTGC ACCAGCTGGA CGTTTTTCGG CGCAGTGGGC
CAGGCCGCCG AGCAGTTATG GTCGTTTCTG CCGATTTATC TGGGGCCCAT CGTGCTGATG
GTACTGGCGC CCTGGGTGCT GCAGAAGATG GTGCTGATCA GCAAACAGGA AAACATCACG
TCCATCGCCG ACTTCATCGC GGCGCGCTAT GGCAAGTCTC AGCCCCTGGC GGTGATGGTG
GCGCTGATCT GCCTGATCGG CATGCTGCCG TACATCGCGT TGCAGCTCAA AGGCATCGTG
CTGGGGGTGA ATATCCTGAT CGGTGCCGTG GCCGATTCCA CCGGCACCCG CGCTCAGGAC
ACCGCGCTGG TGGTGTCGCT GATTCTCGCG CTGTTCACCA TCGTCTTCGG CGCACGCAAT
CTGGATGTCA CCGAACACCA TCGCGGCATG GTGCTGGCCA TTGCCTTCGA GGCGCTGGTC
AAGCTGTTTG CGTTCATGGC AGTCGGCGTG TTCGTCACGT TCGGCCTGTA TGACGGATTC
GACGACCTGT TCAATCAGGC CAAACTCGCG CCACGCCTTG AGGAATACTG GAAAGACACG
ATCAACTGGC CGTCGATGTT CGTGCAGACC GGCGTGGCGA TGATGGCGAT TGTCTGCCTG
CCCCGCCAGT TCCACGTGAC GGTGGTCGAG AACATCGAGC CTCAGGACCT GAATCTCGCC
AAATGGGTGT TCCCGGCCTA TCTGGCGCTG GCCGCGCTGT TCGTGGTGCC GATTGCACTG
GCCGGACAAA TGCTCCTGCC CGGCTCCATG CTGCCCGACT CGTTCGTGAT CAGCCTGCCG
CTGGCGCACG CTCACCCGTC ACTCGCGTTG CTGGCCTTCA TCGGCGGAGC ATCGGCGGCA
ACCGGCATGG TGATCGTCGC CTGCGTGGCG CTGTCGACGA TGATTTCCAA CGACATGCTG
CTGCCGTGGC TGTTAAGACG CAAAAACACC GAGCGGCCGT TCGAAGCGTT TCGTCACTGG
ATGCTTTCTG TCAGACGCAT CAGCATCGTG ATGATTCTCC TGCTGGCCTA TGTCAGCTAC
CGGATGCTCG GGTCGACCGC GAGTCTGGCG ACCATCGGCC AGATCGCGTT TGCCGCGATC
ACCCAGCTGG CTCCCGCCAT GTTCGGTGCG CTGTACTGGA AGCAGGCCAA TCGGCGTGGC
GTCTTCGCAG GGCTGGCGGC CGGTATCTTC ATCTGGTTCT ACACCCTCGT GCTGCCAGTG
GCGGCGCATG GCATGGGCTG GTCGCTGAGC ACTTTCCCGC TGCTTTCCTG GCTGCACAGC
AACCCGTTCG ACCTGCCTAT CTCGCCGATG ACCCAGGGCG TGGTGCTGTC GATGGCCGGC
AACTGCACGT TGTTCGCCTG GGTGTCGATG TTGTCGCGCA CGCGAGTGGC CGAGCACTGG
CAGGCGGGTC GTTTCATCGG TCAGGAAACC CAGGGGCGCG ACTTCAGCCG CCCGCTGCTT
GCGGTGCAGA TCGAGGACCT GCTCAGCCTG TCGGCACGCT TCGTCGGTGA AGACCGCGCG
CGGCAGAGTT TCATCCGTTT CGCCCAAAGG CAGGGCAAGG GTTTCAACCC CAGCCTGAAT
GCCGACGGTG AGTGGATCGC GCATACCGAG CGACTGCTGG CCGGCGTGCT CGGCACCTCC
TCGACCCGCG CGGTGGTCAA GGCCGCTATC GAAGGTCGCG ACATGCAGCT GGAAGACGTT
GTACGCATCG CCGACGAAGC CTCCGAAGTC CTGCAGTTCA ACCGCGCGCT GCTGCAGGGT
GCCATCGAAA ACATTACCCA GGGCATCAGC GTGGTTGACC AGTCCCTGCG GCTGGTGGCC
TGGAATCGTC GCTACCTTGA GCTGTTCAAT TACCCCGAAG GCCTGATCGG CGTTGGCCGG
CCGATTGCCG ACATCATCCG CTACAACGCC GAACGCGGGC TCTGCGGACC GGGCGAGGCA
GAAGTTCACG TTGCGCGCCG TCTGCACTGG ATGCGCCAGG GCCGCGCTCA TACCTCGGAG
CGGTTGTTTC CCAATGGCCA GGTGATCGAA CTGATTGGCA ACCCGATGCC GGGCGGCGGG
TTCGTCATGA GTTTCACCGA CATCACCGAG TTCCGCGCTG CCGAGCACGC CCTCAAAGGC
GTCAATGAAA GCCTTGAGCA ACGGGTAGCC GCACGTACCC ACGAATTGTC CCAGCTCAAC
CAGGCGCTGA CCGAAGCCAA GGGCACCGCT GAAGCTGCCA ACGAATCGAA AACCCGCTTC
CTGGCCGCGG TGAGTCATGA CCTGATGCAG CCGTTGAACG CTGCACGGCT GTTCTCCGCT
GCGCTGTCAC ATCAGCAGGA AGGGATTTCC AGCGACGCTC AGCAACTGGT TCGGCACCTG
GACAGCTCGC TGCGCTCTGC CGAAGACCTG ATCAGCGACC TGCTGGATAT TTCCCGCATC
GAAAACGGTA AGATCACCCC GGACCGCCAG CCGTTTCCGC TCAGCGCGCT GTTTGACACC
CTCGGTGCCG AATTCAAGGC GCTGGCTCAG GAGCAGGGCC TGAGTTTTCG TGTGAGGGGC
AGTTCACTGC GCGTCGACAG CGATATCAAG CTGTTGCGCC GGGTGCTGCA GAACTTTTTG
ACCAACGCGT TCCGCTATGC CAAAGGCCCC ATTCTGCTGG GTGTCAGGCG CTACGGTGAG
AGCCTGAGTC TGGAAGTCTG GGACCGGGGG CCGGGCATTC CCGAGGACAA GCGCAAGGTG
ATCTTCGAAG AATTCAAACG CCTCGACAGC CACAAGACTC ACGCGGCCAA GGGGCTGGGT
CTGGGGTTGG CGATTGCCGA TGGTTTGTGC CGCATTCTCG AGCATCCTTT GCAGGTGCGC
TCATGGACCG GCAAAGGCAG CGTGTTCAGC GTCCGGGTAC CGCTGGCCGC GCCCCAGGCG
GCACTCCCCG CTACGCTGCC CGATGTCAGC CGCCCCGCGC TGAACGGCAC ACAGGTGCTG
TGTGTCGACA ACGAAGACAG CATCCTGATC GGTATGCACA GTCTGCTGTC ACGCTGGGGC
TGTCAGGTCT GGACCGCGCG CAATCGCCAG GAATGCGAAG CGCTGTTGAA CAATGGCGTT
CGACCGCAGA TTGCCCTGGT GGATTACCAC CTGGATGAAG GCGAAACCGG TACTGAACTC
ATGGTCTGGC TACGCACCCG ACTGGGTCAA CCGGTGCCGG GCGTGCTTAT CAGTGCCGAT
GGGCGTGCGG AGTTGATCGC TCAGGTGCAT GCGGCGGGAC TCGATTATCT GCCCAAGCCG
GTCAAGCCTG CAGTGCTGCG CGCGCTGTTG AGCCGGCATG TGAGTCTGGA CGGGTAA
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| Protein sequence | MSLSSGLIAA VALTYMAIMF AIAFYGDRYS ASLRPTMRAW VYSLSLAVYC TSWTFFGAVG
QAAEQLWSFL PIYLGPIVLM VLAPWVLQKM VLISKQENIT SIADFIAARY GKSQPLAVMV
ALICLIGMLP YIALQLKGIV LGVNILIGAV ADSTGTRAQD TALVVSLILA LFTIVFGARN
LDVTEHHRGM VLAIAFEALV KLFAFMAVGV FVTFGLYDGF DDLFNQAKLA PRLEEYWKDT
INWPSMFVQT GVAMMAIVCL PRQFHVTVVE NIEPQDLNLA KWVFPAYLAL AALFVVPIAL
AGQMLLPGSM LPDSFVISLP LAHAHPSLAL LAFIGGASAA TGMVIVACVA LSTMISNDML
LPWLLRRKNT ERPFEAFRHW MLSVRRISIV MILLLAYVSY RMLGSTASLA TIGQIAFAAI
TQLAPAMFGA LYWKQANRRG VFAGLAAGIF IWFYTLVLPV AAHGMGWSLS TFPLLSWLHS
NPFDLPISPM TQGVVLSMAG NCTLFAWVSM LSRTRVAEHW QAGRFIGQET QGRDFSRPLL
AVQIEDLLSL SARFVGEDRA RQSFIRFAQR QGKGFNPSLN ADGEWIAHTE RLLAGVLGTS
STRAVVKAAI EGRDMQLEDV VRIADEASEV LQFNRALLQG AIENITQGIS VVDQSLRLVA
WNRRYLELFN YPEGLIGVGR PIADIIRYNA ERGLCGPGEA EVHVARRLHW MRQGRAHTSE
RLFPNGQVIE LIGNPMPGGG FVMSFTDITE FRAAEHALKG VNESLEQRVA ARTHELSQLN
QALTEAKGTA EAANESKTRF LAAVSHDLMQ PLNAARLFSA ALSHQQEGIS SDAQQLVRHL
DSSLRSAEDL ISDLLDISRI ENGKITPDRQ PFPLSALFDT LGAEFKALAQ EQGLSFRVRG
SSLRVDSDIK LLRRVLQNFL TNAFRYAKGP ILLGVRRYGE SLSLEVWDRG PGIPEDKRKV
IFEEFKRLDS HKTHAAKGLG LGLAIADGLC RILEHPLQVR SWTGKGSVFS VRVPLAAPQA
ALPATLPDVS RPALNGTQVL CVDNEDSILI GMHSLLSRWG CQVWTARNRQ ECEALLNNGV
RPQIALVDYH LDEGETGTEL MVWLRTRLGQ PVPGVLISAD GRAELIAQVH AAGLDYLPKP
VKPAVLRALL SRHVSLDG
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