Gene Psyr_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1584 
Symbol 
ID3367084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1778979 
End bp1779917 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content58% 
IMG OID637651925 
Productaspartyl/asparaginyl beta-hydroxylase 
Protein accessionYP_234670 
Protein GI66044829 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.158822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.286073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTT CATTTGTTGC CAAGGCATCG ATCCTGATGC TGTTTCTGGG CAGCACGCTT 
TACGTTCATT TGCGCGGTCG GGCCCGATTG CCTCTGTTGC GGCAGTTCGT CAACCATTCT
GCATTGTTCG CACCGTACAA CGCACTGATG TACCTGTTTT CCCGCGTGCC GTCCGAGCCA
TATCTGGACC GCAGCAAATT CCCTGAACTG GACGTCCTCA AGGACAACTG GGAAACCATT
CGCGACGAAG CCATGCACCT GTTCGACGAA GGCTATATTC GTGCGGCGGA GAAAAACAAC
GACGCCGGTT TCGGCTCGTT CTTCAAGAAG GGCTGGAAGC GCTTTTACCT GAAGTGGTAC
GACAAGGCCT TGCCGTCTGC CGAGGCGCTG TGCCCGAAAA CAGTCGAACT GGTCAACAGC
ATTCCCAACG TCAAGGGCGC GATGTTCGCG CTGTTGCCGG GTGGCAGTCA CCTCAATCCG
CACCGCGATC CGTTTGCCGG CTCGCTGCGC TATCACCTGG GCCTGTCCAC GCCCAACTCC
GATGACTGCC GGATCTTCGT CGATGGCAAG GAATACGCCT GGCGTGACGG TCAGGACGTC
ATGTTCGATG AGACCTACGT TCACTGGGTC AAGAACGAGA CCGACCAGAC TCGTGTGATT
CTGTTCTGTG ACATCGAGCG TCCGCTGACC AACCGCTTCA TGACCCGTAT CAACCGCAGC
GTCAGCGCGT TTCTGGGCCG CGCCACCGCT CCGCAGAACC TTGACGACGA GCGCGTCGGC
GGAATCAACC AGGCGTATGC ATTCAGCAAG CGTTTCAGCG ACGGCTTCAG TGGCAAGGTC
AAGCAGTTCA AGCGCGCCAA CCCCAAGGCT TACCGCGTAC TGCGCCCGGT TCTGGCAGTG
GCGGTACTGA CGCTGCTGGG CTACTGGTTG TTTGGTTAA
 
Protein sequence
MTLSFVAKAS ILMLFLGSTL YVHLRGRARL PLLRQFVNHS ALFAPYNALM YLFSRVPSEP 
YLDRSKFPEL DVLKDNWETI RDEAMHLFDE GYIRAAEKNN DAGFGSFFKK GWKRFYLKWY
DKALPSAEAL CPKTVELVNS IPNVKGAMFA LLPGGSHLNP HRDPFAGSLR YHLGLSTPNS
DDCRIFVDGK EYAWRDGQDV MFDETYVHWV KNETDQTRVI LFCDIERPLT NRFMTRINRS
VSAFLGRATA PQNLDDERVG GINQAYAFSK RFSDGFSGKV KQFKRANPKA YRVLRPVLAV
AVLTLLGYWL FG