| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1561 |
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| Symbol | |
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| ID | 3367061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1756261 |
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| End bp | 1757952 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651902 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_234647 |
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| Protein GI | 229170802 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.501858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00674056 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAAAA CTTCGCGACC TTTGTACATT TCCTATGCAG GACCCTCACT GCTGGAAATG
CCCCTGCTGA ACAAAGGCAG TGCCTTCACC CCGCAAGAGC GGGTCGAATT CAATCTGATT
GGTCTCCTGC CGCAGAACGT AGAGACGATC GAAGAGCAAG TCACCCGGGT CTACAGCCAG
TACAAACAGT GTGCGAGCGA CCTGGACAAG CATATCTACC TGCGTTCGAT CCAGGACAAC
AACGAAACCC TGTTTTTCCG TCTGCTCGAC TCCCACCTGG ACGAGATGCT GCCGATCATC
TACACGCCGA CGGTGGGGCA GGCCTGTCAG GAATTCTCCA AGATCTACCG CACGCATCGC
GGCCTGTTCA TTTCCTACCC CGAGCGTGAC CGCATCGATG ACATTTTGCG CAGCGCGACC
AAGGATCGGA TCAAGATCAT TGTCGTGACC GACAGCGAGC GAATTCTCGG CCTGGGCGAT
CAGGGCATCG GCGGCATGGG CATTCCGATC GGCAAACTGT CGTTGTACAC CGCTTGCGGC
GGGATCAGCC CGGCGTACAC GCTGCCGATC GTGCTGGATG TCGGCACCAA CAATCGTGAG
CTGCTGGACG ACCCGATGTA CATGGGCTGG CGTCACGAGC GGGTATCGGG CAAGGAATAC
GAAGACTTCA TCGCGCTGTT CATCGACGCG GTGCAGCGTC GCTGGCCGGA CGTGCTGTTG
CAGTTTGAAG ATTTCGCCCA GTCCAACGCC ATGCCGCTGC TCGAAAAGTA TCGCGACGAA
CTGTGCTGCT TCAACGATGA CATCCAGGGC ACCGCTTCGG TTGCCGTGGG TACGTTGCTG
GCGGCCTGCA AGGCCAAGAA TGAAACCCTC GGCCAGCAGA AGGTGGTGTT TGTCGGAGCC
GGTTCGGCAG GCTGCGGGAT CGCCGAGCAC ATCATCGCAG CGATGCGCAT TGAAGGCCTG
AGCGAAAGCG AAGCGCGCAA ACGTATTTTC ATGGTTGATC GTTTCGGCCT GTTGACCGAA
AGCATGGACA ACCTGCTCGA CTTCCAGAAA CGACTGGCGC AAAAGACCGC CGACGTGTCT
GGCTGGACTG CCGGCTCGGA AGCCTTCCCA CAGTTGCTCG ACGTGGTCAC CCACGCCGGC
GCCACCGTAA TGATCGGTGT GTCCGGGCAG CGCGGTCTGT TCACCGAGCA GGTGATTCGC
GAACTGCACA AGCATTGCGC CAAACCCCTG GTCATGCCGC TGTCCAATCC GACGTCCAAA
GTGGAAGCCA CGCCGGAAGA AATCCTGCGC TGGACCGACG GCAATGCGCT GGTGGCCACC
GGCAGTCCGT TTGCGCCAGT GGAAATCAAC GGTCGCACGG TGCATATCGC GCAGTGCAAC
AACTCCTACA TCTTTCCGGG CATCGGCCTC GGCGTGGTGG CCTGCAAGGC ATCGCGCATC
ACTGACCGGA TGCTCATGGC GGCGTCCAAT GCGCTGGCCG AGTGCTCGCC GATGGTGACA
GGGAAGGGCG ATGCGGTGTT GCCGCCGCTC AAGGAAATCC AGCAGGTCAG CCGCAAGATC
GCGTTGGCTG TGGCCAGGGA AGCGCAGGCC GAAGGGCTGG CGCTGGAAAC CACCGAAGAG
GCACTGCTTG AGGCCATCGA GCGTAATTTC TGGTTGCCGG GCTACCGGGC CTACCGCCGT
CGCTCGGTCT GA
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| Protein sequence | MTKTSRPLYI SYAGPSLLEM PLLNKGSAFT PQERVEFNLI GLLPQNVETI EEQVTRVYSQ
YKQCASDLDK HIYLRSIQDN NETLFFRLLD SHLDEMLPII YTPTVGQACQ EFSKIYRTHR
GLFISYPERD RIDDILRSAT KDRIKIIVVT DSERILGLGD QGIGGMGIPI GKLSLYTACG
GISPAYTLPI VLDVGTNNRE LLDDPMYMGW RHERVSGKEY EDFIALFIDA VQRRWPDVLL
QFEDFAQSNA MPLLEKYRDE LCCFNDDIQG TASVAVGTLL AACKAKNETL GQQKVVFVGA
GSAGCGIAEH IIAAMRIEGL SESEARKRIF MVDRFGLLTE SMDNLLDFQK RLAQKTADVS
GWTAGSEAFP QLLDVVTHAG ATVMIGVSGQ RGLFTEQVIR ELHKHCAKPL VMPLSNPTSK
VEATPEEILR WTDGNALVAT GSPFAPVEIN GRTVHIAQCN NSYIFPGIGL GVVACKASRI
TDRMLMAASN ALAECSPMVT GKGDAVLPPL KEIQQVSRKI ALAVAREAQA EGLALETTEE
ALLEAIERNF WLPGYRAYRR RSV
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