| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1548 |
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| Symbol | dapA |
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| ID | 3367047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1741344 |
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| End bp | 1742222 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637651889 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_234635 |
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| Protein GI | 66044794 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0406446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0313891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGCGG GCAGTATGGT GGCACTGGTC ACACCAATGG ATGCACAAGG TCGTCTGGAC
TGGGACAGCC TGAGCAAACT GGTTGACTTC CACTTGCAAG AGGGCACCCA CGCCATTGTT
GCCGTAGGCA CCACCGGTGA ATCGGCGACG CTGGATGTGA ACGAACACAT CGAAGTCATC
CGCCGGGTGG TCACTCAGGT TGCAGGTCGC ATTCCGGTCA TCGCCGGTAC AGGCGCCAAT
TCGACGCGTG AAGCCGTCGA ACTGACCACC AACGCCAAAA ATGCGGGTGC CGACGCGTGC
CTGCTGGTGA CGCCTTACTA CAACAAGCCG ACTCAGGAAG GCCTGTTCCA GCATTTCAGC
CACATCGCCA ATGCCGTCGA CATCCCGCAG ATACTCTACA ACGTGCCGGG CCGTACGGCC
TGCGACATGC TGCCAGAGAC CGTTGCGCGT TTGTCGACGG TAAAAAACAT CGTTGGTATC
AAGGAAGCCA CCGGCAACCT GCAACGCGCC AAGGACATCC TGGCCAGCGT CAGCAGCGAT
TTTCTGGTGT ACTCCGGCGA CGACGCTACA GCAGTCGAAT TGATGCTGCT GGGCGGCAAG
GGCAATATTT CCGTGACCGC CAACGTTGCA CCGCGCGCCA TGAGCGATCT GTGCGCAGCG
GCCATGCGTG GCGATGCGCA AACGGCCCGG GCGATTCACG AAAAGCTCAT GCCGCTCAAC
AACACCCTGT TCATCGAATC CAACCCTATC CCCGTGAAGT GGGCCTTGCA TGAAATGGGT
CTGATGCCAG ACGGTATCCG TCTGCCGCTT ACCTGGCTCA GCGAAGCCTG TCATGAACCG
CTGCGTCAGG CCATGCGCCA GTCCGGCGTC CTGGTTTAA
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| Protein sequence | MIAGSMVALV TPMDAQGRLD WDSLSKLVDF HLQEGTHAIV AVGTTGESAT LDVNEHIEVI
RRVVTQVAGR IPVIAGTGAN STREAVELTT NAKNAGADAC LLVTPYYNKP TQEGLFQHFS
HIANAVDIPQ ILYNVPGRTA CDMLPETVAR LSTVKNIVGI KEATGNLQRA KDILASVSSD
FLVYSGDDAT AVELMLLGGK GNISVTANVA PRAMSDLCAA AMRGDAQTAR AIHEKLMPLN
NTLFIESNPI PVKWALHEMG LMPDGIRLPL TWLSEACHEP LRQAMRQSGV LV
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