Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1543 |
Symbol | |
ID | 3367042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1736975 |
End bp | 1738408 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637651884 |
Product | peptidase M48, Ste24p |
Protein accession | YP_234630 |
Protein GI | 66044789 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.457387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0662018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTT TGCGTCCTAC ACTGCTCACC CTCGCTTGCC TGTTCGCTAC ACACGGCATG GCGGATGACC TCCCCTCGCT TGGTGACGCC AGCTCCTCGA TTGTCTCCCC CGAACAGGAG CACCGTCTGG GCCGTGCGTG GCTGGGGTTG CTGCGCGGCC AGGTGGCGCA GCTGTCGGAC CCGCAACTCA AGGACTACGT CGAGACTTCG GTCTACAGCC TTGCCGAGAC CAGTCAGGTT CAGGACCGGC GGCTTGAATT CATCCTGATC AACAGCCCGC AGCTCAACGC CTTTGCCGCA CCCGGCGGCA TCATCGGCGT CAACGGCGGG TTGTTTCTCA ACGCTCAGAC CGAGGGTGAG TATGCCTCGG TACTGGCTCA CGAACTGGCT CACTTGTCAC AACGCCACTT CGCCAGGGGC ATCGAGGCCC AGCAACGCAT GCAGGTGCCG GTCATGGCCG CGATGCTGGC GGGTATCGTC ATGGCAGCCG CAGGCGCCGG TGACGCGGGT ATCGCCACCA TCGCCGGCTC ACAGGCTGCC GCGATCCAGG AACAACGGCG CTTTTCGCGC CAGAACGAGC AGGAGGCCGA CCGCATCGGC ATTCTCAACC TGGAGAAGGC CGGTTATGAC CCGCGCAACA TGCCGACCAT GTTCGAGCGC CTCATGCGCC AGTATCGATT CGACGCCAGG CCTCCGGAGT TTCTGCTGAC TCACCCGGTC AGCGAGTCGC GGATCGCCGA CACACGCAAC CGTGCCGAGC AGGCCAAACC GGGCGGCAAG GAAGACAGTC TGCTGTACCA ACTGATGCGC GCCCGCGTGG CGCTGATCTA CGAAGAAACC CCAGGCATTG CCGCCAAACG CTTCCGTGCG CAACTGGTTG AAAACCCGAA ATCCGATCCG GCGCGCTATG GCCTGGCCAT CGCGCAGATC AAGGGCGGAC AACTGAACGA GGCCAGGGAA ACCCTCAAGC CATTGCTCGA AAAAGCGCCG AATGACATTA CCTACAACCT GACGCAGATC GACCTGGACA TCACCAATAA CCGCCTGGCC GATGCGCAGC AGCGTGTCGA TCGCATGCTG ACGCTGTACC CCGGCAATTA TCCGCTCAAT GACGTGCGTA TCGACGTGCT GCTCAAGCAG AACCGCACGG CCGAAGCCGA GAAAAGCCTT GAAGCACTGC TCAAGACCCG CCCGGATGAT CCGGACATCT GGTACGTCGT GGCGGAAACC CGTGGCCTGA ACGGCAACAC GATCGGCCTG CATCAGGCGC GCGCCGAGTA TTTTGCGCTG GTCGGTGATT TCCGTCAGGC GATCCAGCAG CTGGACTTCG CCAAACGCCG TGCGGCCAAT AATTTTCAGC TGGCGTCACG TATCGATGCG CGGCAAAAGG ATCTGATCGA GCAGGAGCGG ATGGTCAAGG ACATGATGAA CTGA
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Protein sequence | MNFLRPTLLT LACLFATHGM ADDLPSLGDA SSSIVSPEQE HRLGRAWLGL LRGQVAQLSD PQLKDYVETS VYSLAETSQV QDRRLEFILI NSPQLNAFAA PGGIIGVNGG LFLNAQTEGE YASVLAHELA HLSQRHFARG IEAQQRMQVP VMAAMLAGIV MAAAGAGDAG IATIAGSQAA AIQEQRRFSR QNEQEADRIG ILNLEKAGYD PRNMPTMFER LMRQYRFDAR PPEFLLTHPV SESRIADTRN RAEQAKPGGK EDSLLYQLMR ARVALIYEET PGIAAKRFRA QLVENPKSDP ARYGLAIAQI KGGQLNEARE TLKPLLEKAP NDITYNLTQI DLDITNNRLA DAQQRVDRML TLYPGNYPLN DVRIDVLLKQ NRTAEAEKSL EALLKTRPDD PDIWYVVAET RGLNGNTIGL HQARAEYFAL VGDFRQAIQQ LDFAKRRAAN NFQLASRIDA RQKDLIEQER MVKDMMN
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