| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1542 |
|---|
| Symbol | |
|---|
| ID | 3367041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1735836 |
|---|
| End bp | 1736894 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637651883 |
|---|
| Product | quinolinate synthetase |
|---|
| Protein accession | YP_234629 |
|---|
| Protein GI | 66044788 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0379] Quinolinate synthase |
|---|
| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.061023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGA TCTCCGAACG TTTCCTGGTG CAGGCGCATC TCGATGCCAA ACAGCCCAGG
ACGTTGAGCC CGGCAGAGCA GGCGCGTTAC CGTGCCGACA TTGCTGCTGA ACTCAAGAAG
CAGGACGCCG TGCTGGTTGC TCACTATTAC TGTGATCCGG TTATCCAGGC GCTGGCCGAG
GAGACCGGTG GCTGCGTGGC CGACTCCCTG GAAATGGCGC GCTTCAGCAA TAACCACGCG
GCCAGCACTG TATTGGTGGC GGGTGTGCGT TTCATGGGCG AAACCGCGAA GATCCTCAAC
CCGGAAAAAC GCGTGTTCAT GCCGACGCTT GAAGCCACCT GCTCGCTTGA CGTGGGGTGC
CCGGTCGACG AGTTTTCCGC CTTTTGCGAC CAGCACCCGG AACGTACCGT GGTGGTGTAT
GCCAACACCT CGGCAGCCGT CAAAGCCCGC GCGGACTGGG TGGTGACCTC AGGCTGTGCG
CTGGAAATCG TTGAGAGCCT GATGGACAAC GGTGAGAAAA TCATCTGGGC GCCAGACAAG
CACCTGGGTC GCTACATCCA GCGTGAAACC GGTGCCGACA TGCTGTTGTG GGACGGTGCC
TGCATCGTTC ACGAAGAGTT CAAGTCCAAG CAGCTCGAAG ACATGAAAGC CCTGTACCCC
GAGGCGGCGA TTCTGGTTCA CCCGGAGTCG CCGGAAGCGG TCATCGAGCT GGCTGACGTG
GTCGGCTCGA CCAGTCAGAT GATTGCGGCA GCGCAACGCC TGCCCAACAA GACGTTCATC
GTTGCCACTG ACCGGGGCAT CTTCTACAAG ATGCAGCAGC TGTGCCCGGA CAAGATCTTC
ATCGAGGCGC CTACGGCCGG CAACGGCGCG GCGTGCCGGA GTTGTGCACA TTGCCCATGG
ATGGCGATGA ATACGCTTGA ACGCACCTTG CAGTGCCTGC GTGAGGGCAG TAACGAGATA
TTCGTCGACC CGGCGCTGAT CCCCCATGCT GTACGCCCCT TGCAGCGCAT GCTGGACTTC
ACTCAGGCAG CGCGTTTGCG ACAGGCCGGC AACGCCTGA
|
|---|
| Protein sequence | MTQISERFLV QAHLDAKQPR TLSPAEQARY RADIAAELKK QDAVLVAHYY CDPVIQALAE
ETGGCVADSL EMARFSNNHA ASTVLVAGVR FMGETAKILN PEKRVFMPTL EATCSLDVGC
PVDEFSAFCD QHPERTVVVY ANTSAAVKAR ADWVVTSGCA LEIVESLMDN GEKIIWAPDK
HLGRYIQRET GADMLLWDGA CIVHEEFKSK QLEDMKALYP EAAILVHPES PEAVIELADV
VGSTSQMIAA AQRLPNKTFI VATDRGIFYK MQQLCPDKIF IEAPTAGNGA ACRSCAHCPW
MAMNTLERTL QCLREGSNEI FVDPALIPHA VRPLQRMLDF TQAARLRQAG NA
|
|---|
| |