Gene Psyr_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1502 
Symbol 
ID3367001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1689666 
End bp1690136 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content58% 
IMG OID637651844 
Productlow molecular weight phosphotyrosine protein phosphatase 
Protein accessionYP_234590 
Protein GI66044749 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.240975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC TATTTATGTG TACCGCCAAT AGCTGCCGGA GCGTGCTCTC TGAAGGCTTG 
TTCAACCACC TTGCGCCTGA CGGAATGGTG GGCGTCAGCT CTGGCAGCTT TCCCAGCGGA
AGTTTGAACC CCCGCGCAGT GAGTACCTTG CAAGGTCTAG GCGTGGATAC TTCGGCGCTC
TACAGCAAGG GATCGGAGAG TTTCCAGGAA AACCTGCCTG ATATTGTCAT CACTGTCTGC
GACAAGGCCG GAGGCGAGCC ATGCCCGGTA TACTTCGGAC CCGCCATCAA AAGCCACTGG
GGCCTGTCCG ACCCCTCGGA CGTCGAGGGC AGCGATGAGG AGGTCCAGGC CGCGTTTGAC
GCCACCGTGG CGCATATTCG CCGGCGTTTC GACGCCTTCT TCGCACTTGA CTTCAACGCG
CTCGACTCCA CGGAGCTGAA ACGTGTCCTC GATGAGATAG GTGCACTGTG A
 
Protein sequence
MKVLFMCTAN SCRSVLSEGL FNHLAPDGMV GVSSGSFPSG SLNPRAVSTL QGLGVDTSAL 
YSKGSESFQE NLPDIVITVC DKAGGEPCPV YFGPAIKSHW GLSDPSDVEG SDEEVQAAFD
ATVAHIRRRF DAFFALDFNA LDSTELKRVL DEIGAL