Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1497 |
Symbol | |
ID | 3366996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1685719 |
End bp | 1686405 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637651839 |
Product | heavy metal response regulator |
Protein accession | YP_234585 |
Protein GI | 66044744 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC TGGTAGCCGA AGACGAACCT AAAACTGGAA TCTATCTGCA GCAAGGCCTG CGGGAGGCTG GCTTCAATGT GGACCGCGTG GTCACAGGCA CAGATGCCGT TGACCAGGCG CTCAATGAAG CCTATGACCT GTTGATTCTC GACGTGATGA TGCCAGGCCT CGATGGCTGG GAAGTCATCA GACGCCTTCG CACCGTTGGC CAATCCGTAC CGGTACTGTT TCTGACCGCA CGCGACGGGG TAGACGACCG AGTCAAGGGG CTGGAGCTGG GCGCCGATGA TTACCTGGTT AAGCCATTTG CTTTTTCAGA ATTGCTGGCA CGGGTGCGAA CGCTACTGCG GCGCGGCAGC AGCAACCTCC CGGTTCAAAC TAGCTTGCAA ATCGGAGACC TTCAGGTGGA TTTGCTCAAG CGTCGAGCCA CCCGGGGCGG CAAGCGAATC GACCTCACGG CCAAAGAGTT TGCACTGCTG GAATTGCTGA TGCGCCGGCA AGGTGAGGTG CTGTCCAAAT CGCTGATAGC TTCCCAAGTC TGGGACATGA ATTTTGACAG CGACACAAAT GTCATTGAAG TGGCCATACG GCGGTTAAGG GCCAAGATTG ACGATGACTT CGAGGCAAAA CTGCTGCATA CCTGCCGGGG AATGGGTTAC ATGCTAGACG CGCAGGACGA AGGATGA
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Protein sequence | MKLLVAEDEP KTGIYLQQGL REAGFNVDRV VTGTDAVDQA LNEAYDLLIL DVMMPGLDGW EVIRRLRTVG QSVPVLFLTA RDGVDDRVKG LELGADDYLV KPFAFSELLA RVRTLLRRGS SNLPVQTSLQ IGDLQVDLLK RRATRGGKRI DLTAKEFALL ELLMRRQGEV LSKSLIASQV WDMNFDSDTN VIEVAIRRLR AKIDDDFEAK LLHTCRGMGY MLDAQDEG
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