| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1478 |
|---|
| Symbol | |
|---|
| ID | 3366977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1667185 |
|---|
| End bp | 1668228 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637651820 |
|---|
| Product | regulatory protein, LysR:LysR, substrate-binding |
|---|
| Protein accession | YP_234566 |
|---|
| Protein GI | 66044725 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAA GCCTACGCCA GCTACAAATT TTCTGCGCCG TCGCGCAGCA CGGTAGCACC
ACCAGCGCCG CCATTTCGGT GTCACTGTCC CAATCTGCAA CCAGCGCCGC ACTGAACGAG
TTGGAAAGCG CCTTGGATAC CAGGCTGTTC GACCGTGTAG GCAAGCGTTT AGTGCTGAAC
GATAACGGCC ATGCCTTACT GCCTCAAGCC AGAAGGATGC TTGAGAATGC ACAACAGATA
GAGGCCAGTT TCTTACCCGG CCATGCCGGG CTGAAGACAC GCTTGCGGGT AGGATGCAGT
ACCACGATAG GCAATTATGT TCTGCCATTG ATTCTCGGTG AGCTACGTCA ATCAACACCA
CATTTGAGGG TCGATGTCGA CATGGCCAAC AGCATGGCTA TCGCAAGAAG AGTCGCTGAT
TTCGAGATTG ATATGGGCCT GATCGAGGGG CCTTGCCACC TGCCCGAACT CAGTGCCGAG
CCTTGGCTAA TTGATGAGTT GCTTATTGCC GCAGGCCAAC GGCACCCCTT GGCACTAAAG
CAGCAGGTCA CACTTGATGA TCTTCGTACC GCTGAATGGC TACTGCGCGA GCCAGGTTCT
GGTACCCGTG AAGAAGTCGA ACAATTGCTG CTGCGTCATT TGCACGATCT CGCCGAAACG
CGCCAGATCG GCAGTTCAGA GGCCATCAAG CATACCCTCG CACAAGGCAT CGGCATCAGT
TGCCTGTCCC GCTGGGTCGT TCGGGATCTA CTGGCCTCTG AAGTCTTGGT TGAACTGCCG
CACGCGTTGC CTGCACTGAC CCGACGTTTT TTTCTGATCC GTCACCGGGA CAAATACATC
TCGCCTGGGC TTGAGCGATT CTGGGAAAAA TGCAGTCAAT TCGTGAGCCA GGAGCAGCTA
GACCTATTTA TAAAACAGGT AAGAGCTACC AAAACAAGTT GTTTCCGGAA TTTATCAACG
ACGCATAAAG TCAACTCATT GCCCTGCAGC GATGAACGAG TTGTATATGC CAAGGCGCGA
CTGGGTGCCT TGCTTACCCT ATGA
|
|---|
| Protein sequence | MKLSLRQLQI FCAVAQHGST TSAAISVSLS QSATSAALNE LESALDTRLF DRVGKRLVLN
DNGHALLPQA RRMLENAQQI EASFLPGHAG LKTRLRVGCS TTIGNYVLPL ILGELRQSTP
HLRVDVDMAN SMAIARRVAD FEIDMGLIEG PCHLPELSAE PWLIDELLIA AGQRHPLALK
QQVTLDDLRT AEWLLREPGS GTREEVEQLL LRHLHDLAET RQIGSSEAIK HTLAQGIGIS
CLSRWVVRDL LASEVLVELP HALPALTRRF FLIRHRDKYI SPGLERFWEK CSQFVSQEQL
DLFIKQVRAT KTSCFRNLST THKVNSLPCS DERVVYAKAR LGALLTL
|
|---|
| |