Gene Psyr_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1446 
Symbol 
ID3366945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1636210 
End bp1636878 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content57% 
IMG OID637651788 
Producthypothetical protein 
Protein accessionYP_234534 
Protein GI66044693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.116738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTT TTTTGAAGTT GGCGGACTCC CAACGCGCCC ACATCACAAG CTTGAGAATA 
GCCATTGTAT TGCTCGCGCT TATTAATGCC GGGCTCGGTG TCGGCTGGTG GAGCGCCCCC
AAGCAGATGA CCGTTCACGT TCCGCCGGAT CTGCGCTCGG GCAGTACACG CCTGTGGTGG
GACATCCCTC CCCAGTCGGT ATACACATTC GGCCTGTACA TCTTTCAGCA AATGAACCGA
TGGCCGGTTG ATGGTGAGCA GGATTACCAG GCAAATATCA CCCGTCTTGA TGCTTACATC
ACGCCGTCTT GCAAGCATTA CCTGCAAAGT GATTTTGAAC TGCGCAGGTC TAGCGGTGAG
CTACGCAAGC GCGTCCGGGG CGTTTACGAA ATCCCGGGGC GAGGCTATGG AGATTCGCCC
GAGATCAGGA CGGTGACCAA CTCTATCGAC GACTGGACTG TCACGCTCGA CATCACAGCC
GACGAGTATT ACGGCGGGCA GTTGGTCAAG CGTGCCCTCG CGAGATACCC GCTCCACGTT
GTACGTATGG ACGTCGACCC TGAAACCAAT CCCTTCGGCT TGGCCTGGGA TTGCTACAAC
GGCGCACCAC AGCGTATCGA GGGCAATGTT GAAGCTCCCG CAACTCCGTC GAAAGGAGTC
TTCAAATGA
 
Protein sequence
MSRFLKLADS QRAHITSLRI AIVLLALINA GLGVGWWSAP KQMTVHVPPD LRSGSTRLWW 
DIPPQSVYTF GLYIFQQMNR WPVDGEQDYQ ANITRLDAYI TPSCKHYLQS DFELRRSSGE
LRKRVRGVYE IPGRGYGDSP EIRTVTNSID DWTVTLDITA DEYYGGQLVK RALARYPLHV
VRMDVDPETN PFGLAWDCYN GAPQRIEGNV EAPATPSKGV FK