| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1442 |
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| Symbol | |
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| ID | 3366941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1630375 |
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| End bp | 1633383 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637651784 |
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| Product | hypothetical protein |
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| Protein accession | YP_234530 |
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| Protein GI | 66044689 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.418268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.188514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTTT TTCAACGGCT CAAAAGCCGC GCGTCCCTCA ATTCAGCTAC GCAGACGGAT
ATAGCGGGCG ACCCTCTGCT GAGCGAGCCT TCAGCGGTCG AACTTGAACA GCCTGAGGAT
GATCTGGTTG GGGATTTGAA AGCTTCAGAT CAAAACGATG TGGATGCTGC CCTTGAACGT
TACCTGAAGC GACTGGAGGA TCAGGGCATA CCCGCGCCAG GCGATTGGAG AAACCCGAAG
CAGAAGCCTG CCACAGTTGG CGACGTCGCC GCGCTGTACG ACGTCAAGCC GAGCTTTGTC
GACCTCCTTC CATGGATTGA GTACCTGCCA GCTGAGCAAG CGATGCTGCT TGAGGATGGC
AAATCCTTGG CAGCATTCTT CGAACTGACT CCGATCGGCA CTGAAGGCCG TGATCCCGAA
TGGCTTCGCA AGGTGCGTGA CGCCTTGGAG AACGCGCTGC AAAACAGTTT TGACGAGCTC
GATACCTCAC CTTGGGTTGT GCAGTTCTAC GCGAAGGACG AAACCAGCTG GGATGACTAC
CTTCGGAACC TGCGTGAATA CATCCGACCA CAGGCTAAAG GCAGCCCGTT CTCGGAGCTG
TACCTGGATC TTTTCAAACA TCACCTCGAC GCAATCGCCA AACCTGGTGG TCTTTTTGAA
GACACCACAG TTTCAAAATT GCCTTGGCGT GGCCAGCAGC GCCGCGTGCG GGTGGTCGTG
TATCGCCGGG TAGTCGGTGA TGCAGCGTTC CGTGGCCAAA CCCCTGCCAT GCATCTGGAC
AACATTTGTC AGCGCTTCAC AGGAGGTCTG GCCAACGCCG GCATTAAAAG CAAACGGATG
GACGGTTACG ACATCCGACA CTGGCTCCTG CAGTGGTTCA ACCCTCATCC CGATCACCTG
GGAACGACGC TCAAAGACTT TGATCGCTTC TTTCAACTGG TGAACAAACG CACAGAGGAT
GCCGGCGAGG ATCTCCCACT GGTCACTGGC GACGACTTCG CACAGGGACT CTTTTATCGA
GAGCCAAAAT CCGACAGTCA AAAAGGCTTG TGGTACTTCG ATGGCCAGCC TCACAGAGTC
ATCATGCTGG ATCGGCTGCG CGAAGCCCCG AAGACCGGCC ACCTGACTGG CGAAACACGT
AAAGGCGGTG ATGCCTTGCA TGCCCTGTTC GACAAGTTGC CTGAGGACAC TGTGTTGGCC
ATCACCCTGG TCATCACCCC TCAGGACGTG CTGGAGGCTC ATCTTGAGAA GCTGGCACGC
AAGTCGGTGG GTGACAACCA AGCTTCACTA CTGACCCGCG AAGCGGTAAA CGATGCCAGG
AAACTGATCG GTCGTGAGCA CAAGCTGTAC CGAGGCAGCA TCGCCTTTTA CCTCAAGGGA
AATGACGAAG CACAGCTCAC CGCGCGCAGC ATGCAGTTGA CCAACGCATT GCTGGGTGCC
GGTATGGAAC CCGTAGCATC TGACGACGAG GTGGCCCCAC TCAACAGCTA CCTCCGTTGG
CTTCCCGGGA ACTTCGACGT CAATCAAAAG CGAGCCATGG ACTGGTACGT GCAGATGATG
CTCGCCCAGC ATGTTGCAAA CCTGTGCCCT GTGTGGGGTC GCTCCAGTGG TACCGGGCAT
CCTGGCATCA CGCTATTCAA CCGTGGTGGG GCTCCACTGA CATTTGATCC ATTCAACAAG
CTGGATCGTC AGATGAATGC CCACATGTTT CTGTTCGGCC CCACAGGGGC AGGTAAGTCC
GCCACGTTGA ATAACCTGCT CAACCAGCTC ATTGCGGTTT ACGCTCCCCG CCTGTTCATC
GTCGAGGCGG GTAACAGTTT CGGTCTACTC GGGGATTTCG CGAAAAAGCT TGGGTTGACA
GTCAACAGGA TCAAGCTGGC CCCGAACTCA GGCGTTAGCC TGGCTCCGTT CGCCGACGCT
ATTCGCTTGG TAAACACACC GAGCCAGGTC AAGACCTTGG ACGCTGATGA CTTAGAGAGC
TCTGACGAGG ACATGAATGC CAAGCCCGAT GAAGACGATG ATGAACGGGA TGTCCTCGGC
GAGATGGAAA TCGTAGCCCG TTTGATGATC ACCGGCGGTG AGGAAAAAGA GGAAGCTCGG
CTGACCCGGG CTGACCGCAG CGTAATCCGA CAGTGCATCC TTGCAGCGGC CAGAATTTGC
TCCGACGCCG ATCGCACCGT CCTGACGGAA GATGTCCGTA ATGCGTTGCG CGCGGCCGGG
GAAGACACCT CCATCCCGGA GGGCAGACGC AATCGGATGC TTGAAATGGC CGAAGCCATG
GACATGTTTT GCATGGGCGC CGACGGGGAG ATGTTCAACC GTACCGGTAC GCCTTGGCCT
GAGGCAGATC TGACCATCGT CGACTTGGCC ACCTACGCAC GTGAGGGCTA CAACGCCCAG
TTGTCGATCG CTTACATCTC GCTGATCAAC ACCGTGAACA ACATAGCGGA GCGTGATCAG
TACAAGGGCC GTCCTCTGGT CAACGTGACA GACGAAGGCC ACATCATTAC CAAAAACCCC
CTCCTCGCCC CTTACATTAT GAAGATCACC AAAATGTGGC GAAAGCTCGG GGCCTGGTTC
TGGCTGGCAA CACAGAACAT GGATGACTTT CCTCCCTCAA CTGCACCAAT GCTCAACATG
ATCGAGTGGT GGATCTGCTT GAACATGCCG CCTGACGAAG TGGAGAAGAT CTCCCGTTTC
CGTGAGCTCA CACCTGCACA GAAGGGCTTG ATGCTGTCAG CACGCAAAGA GAGCGGTAAA
TACACCGAAG GCGTTGTTCT TTCGAAATCG ATGGAAGTCC TGTTTCGCGC TGTTCCGCCG
AGCCTGTACC TGGCATTGGC CATGACCGAG CCTGAAGAGA AAAAACAACG TTACGACCTG
ATGCAGTCCA TGGGTGTCGA CGAGTTGGGA GCTGCACTGG AAGTAGCCGC AGATCTCGAC
AGGAAACGAG GTATTGAACC CCTGAACATT ACATTCCCAA CACCCCGTGC ATTGGAGAAC
CTGGCATGA
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| Protein sequence | MTLFQRLKSR ASLNSATQTD IAGDPLLSEP SAVELEQPED DLVGDLKASD QNDVDAALER
YLKRLEDQGI PAPGDWRNPK QKPATVGDVA ALYDVKPSFV DLLPWIEYLP AEQAMLLEDG
KSLAAFFELT PIGTEGRDPE WLRKVRDALE NALQNSFDEL DTSPWVVQFY AKDETSWDDY
LRNLREYIRP QAKGSPFSEL YLDLFKHHLD AIAKPGGLFE DTTVSKLPWR GQQRRVRVVV
YRRVVGDAAF RGQTPAMHLD NICQRFTGGL ANAGIKSKRM DGYDIRHWLL QWFNPHPDHL
GTTLKDFDRF FQLVNKRTED AGEDLPLVTG DDFAQGLFYR EPKSDSQKGL WYFDGQPHRV
IMLDRLREAP KTGHLTGETR KGGDALHALF DKLPEDTVLA ITLVITPQDV LEAHLEKLAR
KSVGDNQASL LTREAVNDAR KLIGREHKLY RGSIAFYLKG NDEAQLTARS MQLTNALLGA
GMEPVASDDE VAPLNSYLRW LPGNFDVNQK RAMDWYVQMM LAQHVANLCP VWGRSSGTGH
PGITLFNRGG APLTFDPFNK LDRQMNAHMF LFGPTGAGKS ATLNNLLNQL IAVYAPRLFI
VEAGNSFGLL GDFAKKLGLT VNRIKLAPNS GVSLAPFADA IRLVNTPSQV KTLDADDLES
SDEDMNAKPD EDDDERDVLG EMEIVARLMI TGGEEKEEAR LTRADRSVIR QCILAAARIC
SDADRTVLTE DVRNALRAAG EDTSIPEGRR NRMLEMAEAM DMFCMGADGE MFNRTGTPWP
EADLTIVDLA TYAREGYNAQ LSIAYISLIN TVNNIAERDQ YKGRPLVNVT DEGHIITKNP
LLAPYIMKIT KMWRKLGAWF WLATQNMDDF PPSTAPMLNM IEWWICLNMP PDEVEKISRF
RELTPAQKGL MLSARKESGK YTEGVVLSKS MEVLFRAVPP SLYLALAMTE PEEKKQRYDL
MQSMGVDELG AALEVAADLD RKRGIEPLNI TFPTPRALEN LA
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