Gene Psyr_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1437 
Symbol 
ID3366936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1626243 
End bp1627124 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content53% 
IMG OID637651780 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_234526 
Protein GI66044685 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTC AAGCGCTGAA CCTGTTTGTC AGATCCATGG AAATGGGAAA CATCACCGCT 
GCTGGGGCGG AGTTAGGGCT GGTGCCTTCG GTAGCGAGTC AAAAACTCGC CAAGCTCGAG
AAGTCATTGG GCATGCGGTT GCTGCATCGC ACGACAAGGC AGGTGACCCT TACAGAGGAC
GGTGCGCTTT TCCTGCCTCA TGCTTCTCGT ATCATAGCCG CTGTGGACGA AGCTTATTTT
ACGACTGTGA AGAGCCAGGA GACGCCTAAA CGCGTATTGC GTATCTCAGC CCCCGGCTCT
TTCGCCAGGG TCTGTTTGAT GCCTGCGGTG ACTCGCTTTC TACGAAGCCA TCCCAATCTG
AAAATAGACC TGGTGCTTTC GGATGAAGTG CAAAACTTAA CGGAGATCGG CATTGATGTG
GCCATTCGCA TCGCCGCACT GAAGGACTCA ACACATGTGG CGCGCAAGCT TGGAAACGAC
ACCCGTATTC TTTGCGCGTC CCCGGCCTAC CTTGAACAAA AAGGTAAGCC GGGAGAGCCC
GAAGATTTGA GCCGCCACGA TTGCATTACA TTGGGAGAAG AGAATCGCTG GCACTTCGCG
GGTAACGCAC GCAATCCATT TTCTATAATT AACGGCTCTT TTAGAGTCAA CTGCGGGGAA
GCTGCTCGAA TAGCGGCTGT AGAAGGGCTG GGGATCGCTT CCATATCGCT ATGGAATGCC
CGAGCGTCCT TGAGTAAAGG GGATCTGGTC GAAGTCCTTT CCTCTTTTGC TCTCGAACAA
AGCCGCGCTG TCTGGGCTAT TTATCCCAGC TCCCGGCAAA TCTCCTCCAA AGCACGCGCG
TTTGTCGATT TCCTCAGCCA AGAATTTGTT GACGGATTCT GA
 
Protein sequence
MDIQALNLFV RSMEMGNITA AGAELGLVPS VASQKLAKLE KSLGMRLLHR TTRQVTLTED 
GALFLPHASR IIAAVDEAYF TTVKSQETPK RVLRISAPGS FARVCLMPAV TRFLRSHPNL
KIDLVLSDEV QNLTEIGIDV AIRIAALKDS THVARKLGND TRILCASPAY LEQKGKPGEP
EDLSRHDCIT LGEENRWHFA GNARNPFSII NGSFRVNCGE AARIAAVEGL GIASISLWNA
RASLSKGDLV EVLSSFALEQ SRAVWAIYPS SRQISSKARA FVDFLSQEFV DGF