Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1437 |
Symbol | |
ID | 3366936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1626243 |
End bp | 1627124 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637651780 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_234526 |
Protein GI | 66044685 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATATTC AAGCGCTGAA CCTGTTTGTC AGATCCATGG AAATGGGAAA CATCACCGCT GCTGGGGCGG AGTTAGGGCT GGTGCCTTCG GTAGCGAGTC AAAAACTCGC CAAGCTCGAG AAGTCATTGG GCATGCGGTT GCTGCATCGC ACGACAAGGC AGGTGACCCT TACAGAGGAC GGTGCGCTTT TCCTGCCTCA TGCTTCTCGT ATCATAGCCG CTGTGGACGA AGCTTATTTT ACGACTGTGA AGAGCCAGGA GACGCCTAAA CGCGTATTGC GTATCTCAGC CCCCGGCTCT TTCGCCAGGG TCTGTTTGAT GCCTGCGGTG ACTCGCTTTC TACGAAGCCA TCCCAATCTG AAAATAGACC TGGTGCTTTC GGATGAAGTG CAAAACTTAA CGGAGATCGG CATTGATGTG GCCATTCGCA TCGCCGCACT GAAGGACTCA ACACATGTGG CGCGCAAGCT TGGAAACGAC ACCCGTATTC TTTGCGCGTC CCCGGCCTAC CTTGAACAAA AAGGTAAGCC GGGAGAGCCC GAAGATTTGA GCCGCCACGA TTGCATTACA TTGGGAGAAG AGAATCGCTG GCACTTCGCG GGTAACGCAC GCAATCCATT TTCTATAATT AACGGCTCTT TTAGAGTCAA CTGCGGGGAA GCTGCTCGAA TAGCGGCTGT AGAAGGGCTG GGGATCGCTT CCATATCGCT ATGGAATGCC CGAGCGTCCT TGAGTAAAGG GGATCTGGTC GAAGTCCTTT CCTCTTTTGC TCTCGAACAA AGCCGCGCTG TCTGGGCTAT TTATCCCAGC TCCCGGCAAA TCTCCTCCAA AGCACGCGCG TTTGTCGATT TCCTCAGCCA AGAATTTGTT GACGGATTCT GA
|
Protein sequence | MDIQALNLFV RSMEMGNITA AGAELGLVPS VASQKLAKLE KSLGMRLLHR TTRQVTLTED GALFLPHASR IIAAVDEAYF TTVKSQETPK RVLRISAPGS FARVCLMPAV TRFLRSHPNL KIDLVLSDEV QNLTEIGIDV AIRIAALKDS THVARKLGND TRILCASPAY LEQKGKPGEP EDLSRHDCIT LGEENRWHFA GNARNPFSII NGSFRVNCGE AARIAAVEGL GIASISLWNA RASLSKGDLV EVLSSFALEQ SRAVWAIYPS SRQISSKARA FVDFLSQEFV DGF
|
| |