Gene Psyr_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1436 
Symbol 
ID3366935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1624983 
End bp1626230 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content54% 
IMG OID637651779 
Producthypothetical protein 
Protein accessionYP_234525 
Protein GI66044684 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCT GGCCACGAGA CGAGGCTAGG CTCACTATTC GATATTGGCC CGCCTGTAGG 
CCAAGGAGAC CTGTTTTGGC TTTCAAAAAA TCAATTTTGT GGACGTCCGT GCCCTTGATA
GTCGCTTTCA GTGGTCAGTA TGCCCAAGCT GATGCGCTCA GCAATCTCCC AAAAGACCAG
CCTCAAGGAA AGATTGAACA GGTTTTCGCA TTTCACGACG CTATGCCAAC GGGCGTCAGC
ATCAGTGAAA GGGGACGCAT TTTTGTCAAC TTCCCCCGTT GGGGCGACAA AGTGCCGTTC
ACTGTCGGAG AATTACGCGA CGGCAAGGTG GTGCCTTATC CCGATGTTGC GCTGAACCAG
CCAGACCCGC AGCATCCGGA AAAGGGTTTC ATCAGCGTCC AGAGTATTGT TGCCGATGGC
TTAGGACACC TATGGATCCT TGATACCGCT GCGCCCGAAT TCTCCAAGCC GCTCGCGGGT
GGCGCCAAGT TGGTGGCCGT TGATCTTCAC ACCAACAAGG TCGTCAAGAC GTTGGTCTTT
CCTGAAAATG TCGTGTTGCC CAGCACCTAC GTCAACGACA TGCGTTTTGA CTTCAGTGCC
GGTAAGGAAG GCGTCATTTA CATCACCGAC TCCTCTCTTA GTGGGCCGGG CGCAATCATT
GTCATGGACA TTGCCACGGG TAAAGCAGTA CGGCGTTTGA GTGGCGCGGC ATCGACATCA
GCTGATCCAA ACTTCGTGCC AAGGGTTGAA GGTCAACTGC TGAGAGTTCG CAATGCCGAT
GGAAGCAGCA AGCCATTTGC CGTTGCTTCT GACGGTATTG CTCTGTCGGC GGATCGCCAG
ACTCTGTACT TCTGCGCACT GTCCAGCCGC CACCTGTATT CGGTATCTAC AAAGCTCTTG
CGCGACCCGA ACGTCACCGA GCAACAGCTC ACCAATGCAG TTAAAGATTT GGGCGAAAAA
GGGCCATCGG ACGGGCTGGA GGCTGACAGC GAAGGTGCTG TCTACGCTGG CGACTATGAA
GACAACAGTA TTCGCAAGCG CCTGCCCGAT GGCAGCTGGC AGACGGTCGT TCACGATCCA
CGCATACTGT GGCCGGACAC ACTCTCTGTG GGAACTGACG GTTACCTTTA CTTCACTGCC
AACCAACTCC ATCGCCAGGC GGGATTTCAT GGTGGCAAAG ATTTACGAGA AAAACCCTAC
AGTTTGATGC GAGTGAAGAT CAACGCAACA CCGGTGCAGA CACGCTGA
 
Protein sequence
MPAWPRDEAR LTIRYWPACR PRRPVLAFKK SILWTSVPLI VAFSGQYAQA DALSNLPKDQ 
PQGKIEQVFA FHDAMPTGVS ISERGRIFVN FPRWGDKVPF TVGELRDGKV VPYPDVALNQ
PDPQHPEKGF ISVQSIVADG LGHLWILDTA APEFSKPLAG GAKLVAVDLH TNKVVKTLVF
PENVVLPSTY VNDMRFDFSA GKEGVIYITD SSLSGPGAII VMDIATGKAV RRLSGAASTS
ADPNFVPRVE GQLLRVRNAD GSSKPFAVAS DGIALSADRQ TLYFCALSSR HLYSVSTKLL
RDPNVTEQQL TNAVKDLGEK GPSDGLEADS EGAVYAGDYE DNSIRKRLPD GSWQTVVHDP
RILWPDTLSV GTDGYLYFTA NQLHRQAGFH GGKDLREKPY SLMRVKINAT PVQTR