Gene Psyr_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1425 
Symbol 
ID3366924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1612927 
End bp1614207 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content56% 
IMG OID637651768 
ProductDNA-directed DNA polymerase 
Protein accessionYP_234514 
Protein GI66044673 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGC GTGAGGCTGT CTTCGCGCTA ATCGACTGCA ATTGCTTCTA TGCCAGCTGC 
GAGCGTGTTT TTCGTCCAGA TCTGGAGAAA ACGCCCATCG TGGTACTCAG CAATAACGAC
GGTTGCGTCA TCGCCCGTAG CTACGACGCC AAGCCATTTG TGAAAATGGG CGCTCCCTAT
TTTCAGATCA GAGAGGTGTT GCGCCGCAAC GGCATCAAGG TGTTCAGCAG CAACTATGCA
CTCTATGGCG ACATGAGCGA GCGTGTCATG TCGATCATCG AGTCGATGGT GCCAGCCTCC
GAGGTCTACA GCATCGATGA GGCGTTCGCA GACCTCACCG GCGTGCCTGG CGATCTCACA
GCGTTCGGTC GACGCATCCG GGCGAACATT CTTAAATGCA CTGGCATTCC TGTGGGTGTG
GGTATCGGTC CTACGAAAAC GCTCGCCAAG CTGGCAAACC ACACTGCTAA GCGACTGCTA
TCCCATACAG GCGGTGTTGT AGACATTTGC GACCTGCATA ACCGCAACTG GGTACTGCGT
AATACGGCGG TCTCAGAGGT CTGGGGGGTA GGGAAGAAGA TGAATGCCCA CCTGGAGGCT
ATGAACATCC GCACCGCAAT GGACCTTGCA ACCGCCGACC CGCGTACTCT GCGCGAACGG
TTCAGCGTGG TCATTGAAAA GACCGCACGT GAGCTGGCAG GTACTTCGTG CCTGGAGCTG
GGCGAAGCTG CACCACCCAA GCAGGAGATC TGTTGCAGCC GAATGTTCGG CAAACGGCTA
ACCACCATTC AGCCTATCAA AGAGGCGGTG GCCACCTACA CTCAGCGTGC GGCCGAGAAG
CTCCGTTCTC AAAACTCGCT GTGCAAGAAG ATCCGCGTCA GCATCCGTAC CGGCATGTTC
AATCCGGAAG AAGCCAAGTA CGCCAACGGC GCTTTGGTTG AATTGCCATA CCCCACCAAC
GACGTGCGCT TGATGACCAG GGCGGCGACT GAGGCAGTGA ATCGTTTGTT TCGACCGGGG
TTCAAGTACA GCAAAGCTGA GGTTCTGTTG CTGGATCTGA GACAGCCTGG CGAATTTACG
GATGACATGT TCGCTGCTTC GCAGCCGGCA TCTTCAGAGA AGGTGATGGG AGTCCTGGAT
GAGATCAATA CACGCTGGGG CAGAGGGACT TTACGAGCTG GGAGTGTTCC TTCCAATCCG
GAGTGGGCTA TGCGTCGCGA GCTGATGAGT CAAAGTTATA CGACCAGGCT CGATCAGTTG
TGGGAGGTGA AAAGTGTGTA A
 
Protein sequence
MEKREAVFAL IDCNCFYASC ERVFRPDLEK TPIVVLSNND GCVIARSYDA KPFVKMGAPY 
FQIREVLRRN GIKVFSSNYA LYGDMSERVM SIIESMVPAS EVYSIDEAFA DLTGVPGDLT
AFGRRIRANI LKCTGIPVGV GIGPTKTLAK LANHTAKRLL SHTGGVVDIC DLHNRNWVLR
NTAVSEVWGV GKKMNAHLEA MNIRTAMDLA TADPRTLRER FSVVIEKTAR ELAGTSCLEL
GEAAPPKQEI CCSRMFGKRL TTIQPIKEAV ATYTQRAAEK LRSQNSLCKK IRVSIRTGMF
NPEEAKYANG ALVELPYPTN DVRLMTRAAT EAVNRLFRPG FKYSKAEVLL LDLRQPGEFT
DDMFAASQPA SSEKVMGVLD EINTRWGRGT LRAGSVPSNP EWAMRRELMS QSYTTRLDQL
WEVKSV