Gene Psyr_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1389 
Symbol 
ID3366884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1570708 
End bp1571169 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content54% 
IMG OID637651728 
Producthypothetical protein 
Protein accessionYP_234478 
Protein GI66044637 
COG category[S] Function unknown 
COG ID[COG4807] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.425607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA ACGATGTACT GCGCAGCGTG CGCTACATGC TCGATATCAG CGACAGCAAG 
ATTGTCGAGA TCACCGCACT GACCGGTTTT GAAGTGTCGA AGAGCGATGT CATCGCTTTC
ATGAAAAAAG AGGAAGAAGA AGGCTATCTG GATTGCAGCG ATGAAATCAT GGCGCACTTC
CTCGATGGCC TGGTCTACTT CAAGCGTGGC AAGGACGACA GTCGTCCGCC ACAGGCGATC
GATTTGCCGA TCACCAACAA TATCGTCCTG AAAAAACTGC GCGTGGCGTT CGAACTGAAA
GAAGACGACA TGCACGCCAT CCTCAAATCA GTCGACTTCC CGGTTTCCAA ACCAGAGCTG
AGCGCCCTGT TCCGCAAGGT CGGACACACC AACTACCGCG CCTGTGGCGA TCAACTGCTG
CGCAATTTCC TCAAGGGCCT GACCCTGCGC GTGCGTGGCT GA
 
Protein sequence
MMNNDVLRSV RYMLDISDSK IVEITALTGF EVSKSDVIAF MKKEEEEGYL DCSDEIMAHF 
LDGLVYFKRG KDDSRPPQAI DLPITNNIVL KKLRVAFELK EDDMHAILKS VDFPVSKPEL
SALFRKVGHT NYRACGDQLL RNFLKGLTLR VRG