Gene Psyr_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1380 
Symbol 
ID3366875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1564031 
End bp1565143 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content57% 
IMG OID637651719 
Producthypothetical protein 
Protein accessionYP_234469 
Protein GI66044628 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTATG TACCTGACGA TCTTCTATCC CGACACTTTC AAAGCGACGG TCTCGACCTG 
ACCAGCAAGA TTGAAGAGCA CATCAATGAG GTGGCTCCGG GCACGAAAAA CCTTCCGCTG
TACCGCGACA TGATGCTCAC CGTGTTGCGC ATGGCCCAGG ATGACCGTAA CCGCTGGGAC
GTCAAGATAA CGCTGCAGAC CCTGCGCGAA CTGGACAAAG CCTTTCGGGT GCTAGAGCGC
TTCAAGGGCC GCCGCAAAGT CACTGTCTTC GGCTCCGCTC GTACACCAAT GGAACATCCG
CTGTACGCCC AGGCCAGAGA GCTGGGAGAA AAACTGGCCA GCTCCAACAT GATGGTCATC
ACCGGCGCAG GCGGCGGCAT CATGGCGGCA GCCCATGCCG GTGCAGGCTT GAAACACAGC
CTCGGGTTCA ACATTACCCT GCCCTTCGAA CAGCACGCCA ACCCGACGGT AGAGGGCAGC
GAAAACCTGC TGCCCTTCCA CTTCTTCTTC ACGCGCAAGC TGTTCTTCGT CAAGGAAGCC
GACGCGCTGG TGCTATGCCC AGGCGGCTTC GGAACTCTGG ACGAAGCCCT GGAAGTGCTG
ACGTTGATAC AAACCGGCAA AAGCCCGTTG GTGCCTGTGG TATTGCTGGA CACGCCTGGC
GGGAGTTTCT GGCAAGGTGC GCTGGACTTC ATCAAGCACC AGTTGCAGGA CAATCACTAC
ATTCTGCCAG CCGACATGAA GCTGATGAGG CTGGTTTACA GCGCCGACGA AGCGGTGCAA
GAGATCAACC GGTTTTACGC CAACTTCCAT TCCAGCCGCT GGCTGAAAAA CAAGTTCGTG
ATCCGTATGC ATCATGCGCT GAGCGAGCAA GCTCTGGAGC ACATGCAGGA AGCGTTCGCT
GACTTGTGCA TCAATGAAAA CTTTCACCAG CACAGTTATC AGGGCGAAGA ACACGATGAA
GCGCAGTTCA GTCACCTGAC ACGACTGGCG TTCACCTTCA CAGGCCGCAA TCAGGGCAGG
CTTCGTGAAC TGGTGGATTA CATCAACCAA CAGGAAAACT GGGAAGACGC TTCAGCGACC
AGGGACGCAG CTCAGAAACG GGCGCCACAG TAA
 
Protein sequence
MPYVPDDLLS RHFQSDGLDL TSKIEEHINE VAPGTKNLPL YRDMMLTVLR MAQDDRNRWD 
VKITLQTLRE LDKAFRVLER FKGRRKVTVF GSARTPMEHP LYAQARELGE KLASSNMMVI
TGAGGGIMAA AHAGAGLKHS LGFNITLPFE QHANPTVEGS ENLLPFHFFF TRKLFFVKEA
DALVLCPGGF GTLDEALEVL TLIQTGKSPL VPVVLLDTPG GSFWQGALDF IKHQLQDNHY
ILPADMKLMR LVYSADEAVQ EINRFYANFH SSRWLKNKFV IRMHHALSEQ ALEHMQEAFA
DLCINENFHQ HSYQGEEHDE AQFSHLTRLA FTFTGRNQGR LRELVDYINQ QENWEDASAT
RDAAQKRAPQ