Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1380 |
Symbol | |
ID | 3366875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1564031 |
End bp | 1565143 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637651719 |
Product | hypothetical protein |
Protein accession | YP_234469 |
Protein GI | 66044628 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTATG TACCTGACGA TCTTCTATCC CGACACTTTC AAAGCGACGG TCTCGACCTG ACCAGCAAGA TTGAAGAGCA CATCAATGAG GTGGCTCCGG GCACGAAAAA CCTTCCGCTG TACCGCGACA TGATGCTCAC CGTGTTGCGC ATGGCCCAGG ATGACCGTAA CCGCTGGGAC GTCAAGATAA CGCTGCAGAC CCTGCGCGAA CTGGACAAAG CCTTTCGGGT GCTAGAGCGC TTCAAGGGCC GCCGCAAAGT CACTGTCTTC GGCTCCGCTC GTACACCAAT GGAACATCCG CTGTACGCCC AGGCCAGAGA GCTGGGAGAA AAACTGGCCA GCTCCAACAT GATGGTCATC ACCGGCGCAG GCGGCGGCAT CATGGCGGCA GCCCATGCCG GTGCAGGCTT GAAACACAGC CTCGGGTTCA ACATTACCCT GCCCTTCGAA CAGCACGCCA ACCCGACGGT AGAGGGCAGC GAAAACCTGC TGCCCTTCCA CTTCTTCTTC ACGCGCAAGC TGTTCTTCGT CAAGGAAGCC GACGCGCTGG TGCTATGCCC AGGCGGCTTC GGAACTCTGG ACGAAGCCCT GGAAGTGCTG ACGTTGATAC AAACCGGCAA AAGCCCGTTG GTGCCTGTGG TATTGCTGGA CACGCCTGGC GGGAGTTTCT GGCAAGGTGC GCTGGACTTC ATCAAGCACC AGTTGCAGGA CAATCACTAC ATTCTGCCAG CCGACATGAA GCTGATGAGG CTGGTTTACA GCGCCGACGA AGCGGTGCAA GAGATCAACC GGTTTTACGC CAACTTCCAT TCCAGCCGCT GGCTGAAAAA CAAGTTCGTG ATCCGTATGC ATCATGCGCT GAGCGAGCAA GCTCTGGAGC ACATGCAGGA AGCGTTCGCT GACTTGTGCA TCAATGAAAA CTTTCACCAG CACAGTTATC AGGGCGAAGA ACACGATGAA GCGCAGTTCA GTCACCTGAC ACGACTGGCG TTCACCTTCA CAGGCCGCAA TCAGGGCAGG CTTCGTGAAC TGGTGGATTA CATCAACCAA CAGGAAAACT GGGAAGACGC TTCAGCGACC AGGGACGCAG CTCAGAAACG GGCGCCACAG TAA
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Protein sequence | MPYVPDDLLS RHFQSDGLDL TSKIEEHINE VAPGTKNLPL YRDMMLTVLR MAQDDRNRWD VKITLQTLRE LDKAFRVLER FKGRRKVTVF GSARTPMEHP LYAQARELGE KLASSNMMVI TGAGGGIMAA AHAGAGLKHS LGFNITLPFE QHANPTVEGS ENLLPFHFFF TRKLFFVKEA DALVLCPGGF GTLDEALEVL TLIQTGKSPL VPVVLLDTPG GSFWQGALDF IKHQLQDNHY ILPADMKLMR LVYSADEAVQ EINRFYANFH SSRWLKNKFV IRMHHALSEQ ALEHMQEAFA DLCINENFHQ HSYQGEEHDE AQFSHLTRLA FTFTGRNQGR LRELVDYINQ QENWEDASAT RDAAQKRAPQ
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