Gene Psyr_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1366 
Symbol 
ID3366861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1549471 
End bp1550367 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content62% 
IMG OID637651705 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_234455 
Protein GI66044614 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACCA ATCGTTGGGA AGGTCTGGAT GAGTTCGTTG CTGTCGCGGA ATGCGGGCAG 
TTCACGGCGG CGGCTCAGCG GCTCGGGGTC TCCTCGTCGC ACGTCAGCCG TCAGATCGTG
CGTCTTGAAG AACGCCTGCA GACCCGTCTG CTCTACCGCA GTACACGCAA GGTCGCACTC
ACCGAAGCCG GGCAGACCTT TCTGCATCAC TGCCAGCGCC TGCAGGACGG CCGTGAAGAA
GCACTGCGCG CCGTGGGCGA TCTGGCCAGC GAACCGAAGG GGTTGTTGCG CATGACCTGC
GCCGTGGCGT ACGGGGAGCG CTTCATCACG CCGCTGGTCA CGCGTTTCAT GGATGTGTAC
CCACACCTGC GGGTCGATAT CGAGCTGAGC AACGACACGC TGGATCTGGT TCATGAAGGC
ATGGACCTGG CGATTCGTCT GGGTCGGCTG CAGGATTCGC GTCTGGTCGC AACCCGCCTC
GCGCCACGGC AGATGTACCT GTGCGCTTCG CCGTCCTACA TCCAGCGTTA CGGCCGGCCG
CACAGCCTTT CAGAACTGAA TCGCCACAAT TGCCTGATCG GTGGCAGCGA CACCTGGCAG
CTTCAGCAGA ACGGGCGTGA ATTTTCCCAA CGTGTGCAAG GCAACTGGCG CTGTAACAGC
GGCCAGGCCG TGCTGGATGC CGCGCTGCAC GGGGTCGGCT TATGCCAGTT GCCGGATTAC
TACGTGCAGA AACACCTCAA CGACGGCACG CTGGTGTCGT TGCTGGAGGC ACATCAACCG
CCCAACACCG CCGTGTGGGC GCTGTATCCG CAGCAAAGGC ACCTGTCACC CAAGGTGCGC
AAGCTGGTGG ATTATCTTAA GGAAGGGTTG GCGATGCGGG ATGAATATCG CCAATAG
 
Protein sequence
MYTNRWEGLD EFVAVAECGQ FTAAAQRLGV SSSHVSRQIV RLEERLQTRL LYRSTRKVAL 
TEAGQTFLHH CQRLQDGREE ALRAVGDLAS EPKGLLRMTC AVAYGERFIT PLVTRFMDVY
PHLRVDIELS NDTLDLVHEG MDLAIRLGRL QDSRLVATRL APRQMYLCAS PSYIQRYGRP
HSLSELNRHN CLIGGSDTWQ LQQNGREFSQ RVQGNWRCNS GQAVLDAALH GVGLCQLPDY
YVQKHLNDGT LVSLLEAHQP PNTAVWALYP QQRHLSPKVR KLVDYLKEGL AMRDEYRQ