Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1343 |
Symbol | rpsB |
ID | 3366838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1523217 |
End bp | 1523960 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637651682 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_234432 |
Protein GI | 66044591 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.477312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCAAG TCAATATGCG CGATATGCTG AAGGCTGGTT GCCACTTCGG TCACCAGACC CGTTACTGGA ATCCGAAAAT GGGTAAATAC ATTTTCGGCG CGCGTAACAA GATTCACATC ATCAACCTTG AAAAAACCCT GCCTATGTTC AACGAAGCGC TGACTTTCGT TGAGCGCCTG GCTTCGGGCA AAAACAAGAT TCTGTTCGTC GGCACCAAGC GTTCCGCTGG CAAGATCGTT GCTGAAGAAG CAGCACGTTG CGGTTCGCCG TACGTCGACC ATCGCTGGTT GGGCGGCATG CTGACCAACT TCAAGACCAT CCGTCAGTCG ATCAAGCGTC TGCGCGAGCT GGAAGTACAG GCTGAAGACG GTACTTTCGC CAAGCTGACC AAGAAAGAAG CCCTGATGCG TACCCGTGAT CTGGAAAAAC TGGATCGCAG CCTGGGTGGT ATCAAGGACA TGGGCGGTCT GCCGGACGCT CTGTTCGTTA TCGACGTTGA TCACGAGCGC ATCGCGATCA CCGAAGCCAA CAAGCTGGGC ATCCCGGTTA TCGGCGTCGT CGATACCAAC AGCAGCCCGG AAGGCGTTGA CTACATCATC CCTGGCAACG ATGACGCAAT CCGCGCCATC CAGCTGTACA TGGGTTCGAT GGCTGATGCT GTTATCCGTG GTCGTAACAA TGTTGCTGGC GGCACCGACG TCTTCGTCGA AGAAGCTCCA GCTGCAGCTG CTGTAGAAGG CTGA
|
Protein sequence | MSQVNMRDML KAGCHFGHQT RYWNPKMGKY IFGARNKIHI INLEKTLPMF NEALTFVERL ASGKNKILFV GTKRSAGKIV AEEAARCGSP YVDHRWLGGM LTNFKTIRQS IKRLRELEVQ AEDGTFAKLT KKEALMRTRD LEKLDRSLGG IKDMGGLPDA LFVIDVDHER IAITEANKLG IPVIGVVDTN SSPEGVDYII PGNDDAIRAI QLYMGSMADA VIRGRNNVAG GTDVFVEEAP AAAAVEG
|
| |