Gene Psyr_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1318 
Symbol 
ID3366813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1495153 
End bp1497789 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content63% 
IMG OID637651657 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_234407 
Protein GI66044566 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0969534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00571873 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGATA TCGATGCGCG TCTGCGCGAA GACGTTCACC TGTTGGGTGA GCTGTTGGGG 
AATACGATTC GCGAGCAGCG AGGTGCGGAA TTTCTCGACA AGATCGAGCG TATTCGCAAA
GGTGCCAAAG CGGGCAGGCG CGGTTCCGCA GAAGGGGCCG AGCAACTCAG CTCCAGCGTC
GACGGGCTGG GTGATGATGA GCTGCTGCCG GTGGCGCGTG CGTTCAACCA GTTTCTCAAC
CTGGCCAATA TTGCCGAGCA ATATCAGCTC ATGCACCGCC GCGATGATAA ACAGCCGCTG
CCGTTCGAGT CGCGAGTACT GCCCGAGCTG CTTGATCGTC TCAAGGCCGA AGGCCACTCA
CCTGATGCCC TGGCACGCCA GCTCAGCAAG CTGGAAATCG ACCTGGTGTT GACTGCGCAC
CCGACCGAGG TGGCACGTCG CACGCTGATT CAGAAATACG ACGCCATCGC AGCGCAGCTG
GCTGCACTTG ATCATCGCGA TCTCAATAGC ATCGAGCGCA CACAGATTAC TTCGCGCCTG
CAGCGGCTGA TTGCCGAGGC CTGGCATACC GAAGAGATCC GGCGCATCCG ACCCACCCCG
GTCGATGAAG CCAAATGGGG TTTCGCGGTC ATCGAACATT CCCTCTGGCA CGCCATTCCA
AACTACCTGC GCAAGGCTGA CCATGCGCTG CATGCGGCCA CCGGTCTGCA TCTGCCCTTG
GAAGCCGCGC CGATCCGTTT TGCCTCCTGG ATGGGCGGCG ACCGCGACGG CAACCCGAAT
GTCACCGCCG CTGTCACCCG CGAAGTGCTG TTGCTGGCGC GCTGGATGGC CGCTGACCTG
TACCTGCGTG ACGTGGACAA TCTCGCCGCG GAACTGTCGA TGCAGCAAGC CAGCGACGCT
CTGCGTGCCA GCGTGGGTGA CAGCGCCGAA CCCTATCGGG CAGAACTCAA ACGCCTGCGC
GAGCGCTTGC GCGCGACGCG CAACTGGGCC AATGCCTCAC TGAGCGAAAC CCTGCCTGCG
CCGGAAGCGG TGCTGCGAGA CAACCGTGAA CTGCTCGACC CGCTGCTGCT GTGCTTCCAG
TCGCTGCACG AATGCGGCAT GGGTGTCATC GCCGACGGCC CGCTTCTGGA TTGCCTGCGT
CGTGCGGTCA CATTCGGCCT GTTCCTGGTG CGTCTGGATG TTCGCCAGGA TTCCAGCCGT
CACTGCGCAG CGATGACCGA AATCACCGAT TATCTGGGGC TGGGTCGCTA CGAAGAGTGG
GACGAGCAGA CCCGCATCGA TTTTCTGCTG CGTGAATTGA ATAACCGCAG GCCGCTGCTG
CCGAGCTACT TCAAACCGGC CGCCGATACC GCAGAGGTTC TCGCAACCTG CCGCGAGGTG
GCGGCCGCCC CGGCGGCGTC GCTGGGGTCC TATGTCATCT CGATGGCCGG CTCGGCTTCG
GATGTGCTGG CCGTGCAACT GCTGCTCAAG GAATCCGGGC TGCAGCGGCC CATGCGTGTG
GTGCCGTTGT TCGAGACCCT GGCCGACCTG GATAACGCCG GGCCGGTGAT CGAGACGCTG
CTCGGGCTGC CGGGCTATCG CTCGCGTCTG CACGGCCCGC AAGAGGTGAT GATCGGCTAT
TCCGACTCGG CCAAGGATGC CGGCACCACT GCGGCGGCCT GGGCGCAGTA CCGCGCCCAG
GAAAGGCTGG TGGAGATCTG CCGCGAGCAG CAGGTCGAAT TGCTGCTGTT CCACGGCCGC
GGCGGTACAG TCGGTCGTGG CGGCGGCCCG GCGCACGCGG CGATCCTCTC GCAGCCGCCG
GGTTCTGTGG CCGGGCGTTT CCGGACCACC GAGCAAGGGG AAATGATTCG TTTCAAATTC
GGTCTGCCGG ACATCGCCGA GCAGAACCTC AATCTGTATC TGGCTGCCGT GCTGGAAGCG
ACCCTGTTGC CACCGCCACC TCCGCAGCCA GCGTGGCGGA CGATGATGGA CCAGATGGCC
GACGACGGGG TCAGTGCCTA CCGAGCGGTG GTGCGCGAGA ATCCCGAATT TGTCGAGTAT
TTCCGCCAGG CGACACCCGA GCAGGAGCTG GGGCGCTTGC CACTCGGCAG TCGTCCGGCC
AAGCGCCGCG AGGGCGGTGT AGAAAGTCTT CGTGCCATTC CGTGGATCTT CGCCTGGACG
CAGACGCGTC TGATGCTGCC CGCCTGGCTG GGTTGGGAGG CTGCGCTGAG CAAGGCGCTG
GAGCGCGGCG AAGGCGAGGT GCTGGCGCAG ATGCGTGAGC AGTGGCCGTT CTTCAGAACG
CGCATCGACA TGCTGGAAAT GGTCCTTGCC AAAGCCGATG CGGACATCGC CCGACTCTAC
GACGAACGTC TGGTCAGTGC TGAGCTGCAA CATTTGGGTG CACATTTACG CGACCTATTG
TCGCAGGCGT GCAATGTGGT TCTGGGGCTG ACCGGGCAGA CGCAACTGCT GGCTCACAGC
CCTGAAACGC TGGAATTCAT CAGTCTGCGC AACACCTACC TTGACCCGTT GCATTTGCTT
CAGGCGGAGC TGCTGTCGCG CTCGCGTAAT CGTGAAGCCA GTCTGGACAG TCCTCTGGAA
CTGGCGCTGC TGGTGTCCGT AGCGGGGATT GCTGCCGGTC TGCGTAACAC GGGCTGA
 
Protein sequence
MADIDARLRE DVHLLGELLG NTIREQRGAE FLDKIERIRK GAKAGRRGSA EGAEQLSSSV 
DGLGDDELLP VARAFNQFLN LANIAEQYQL MHRRDDKQPL PFESRVLPEL LDRLKAEGHS
PDALARQLSK LEIDLVLTAH PTEVARRTLI QKYDAIAAQL AALDHRDLNS IERTQITSRL
QRLIAEAWHT EEIRRIRPTP VDEAKWGFAV IEHSLWHAIP NYLRKADHAL HAATGLHLPL
EAAPIRFASW MGGDRDGNPN VTAAVTREVL LLARWMAADL YLRDVDNLAA ELSMQQASDA
LRASVGDSAE PYRAELKRLR ERLRATRNWA NASLSETLPA PEAVLRDNRE LLDPLLLCFQ
SLHECGMGVI ADGPLLDCLR RAVTFGLFLV RLDVRQDSSR HCAAMTEITD YLGLGRYEEW
DEQTRIDFLL RELNNRRPLL PSYFKPAADT AEVLATCREV AAAPAASLGS YVISMAGSAS
DVLAVQLLLK ESGLQRPMRV VPLFETLADL DNAGPVIETL LGLPGYRSRL HGPQEVMIGY
SDSAKDAGTT AAAWAQYRAQ ERLVEICREQ QVELLLFHGR GGTVGRGGGP AHAAILSQPP
GSVAGRFRTT EQGEMIRFKF GLPDIAEQNL NLYLAAVLEA TLLPPPPPQP AWRTMMDQMA
DDGVSAYRAV VRENPEFVEY FRQATPEQEL GRLPLGSRPA KRREGGVESL RAIPWIFAWT
QTRLMLPAWL GWEAALSKAL ERGEGEVLAQ MREQWPFFRT RIDMLEMVLA KADADIARLY
DERLVSAELQ HLGAHLRDLL SQACNVVLGL TGQTQLLAHS PETLEFISLR NTYLDPLHLL
QAELLSRSRN REASLDSPLE LALLVSVAGI AAGLRNTG