Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1318 |
Symbol | |
ID | 3366813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1495153 |
End bp | 1497789 |
Gene Length | 2637 bp |
Protein Length | 878 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651657 |
Product | phosphoenolpyruvate carboxylase |
Protein accession | YP_234407 |
Protein GI | 66044566 |
COG category | [C] Energy production and conversion |
COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0969534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00571873 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGATA TCGATGCGCG TCTGCGCGAA GACGTTCACC TGTTGGGTGA GCTGTTGGGG AATACGATTC GCGAGCAGCG AGGTGCGGAA TTTCTCGACA AGATCGAGCG TATTCGCAAA GGTGCCAAAG CGGGCAGGCG CGGTTCCGCA GAAGGGGCCG AGCAACTCAG CTCCAGCGTC GACGGGCTGG GTGATGATGA GCTGCTGCCG GTGGCGCGTG CGTTCAACCA GTTTCTCAAC CTGGCCAATA TTGCCGAGCA ATATCAGCTC ATGCACCGCC GCGATGATAA ACAGCCGCTG CCGTTCGAGT CGCGAGTACT GCCCGAGCTG CTTGATCGTC TCAAGGCCGA AGGCCACTCA CCTGATGCCC TGGCACGCCA GCTCAGCAAG CTGGAAATCG ACCTGGTGTT GACTGCGCAC CCGACCGAGG TGGCACGTCG CACGCTGATT CAGAAATACG ACGCCATCGC AGCGCAGCTG GCTGCACTTG ATCATCGCGA TCTCAATAGC ATCGAGCGCA CACAGATTAC TTCGCGCCTG CAGCGGCTGA TTGCCGAGGC CTGGCATACC GAAGAGATCC GGCGCATCCG ACCCACCCCG GTCGATGAAG CCAAATGGGG TTTCGCGGTC ATCGAACATT CCCTCTGGCA CGCCATTCCA AACTACCTGC GCAAGGCTGA CCATGCGCTG CATGCGGCCA CCGGTCTGCA TCTGCCCTTG GAAGCCGCGC CGATCCGTTT TGCCTCCTGG ATGGGCGGCG ACCGCGACGG CAACCCGAAT GTCACCGCCG CTGTCACCCG CGAAGTGCTG TTGCTGGCGC GCTGGATGGC CGCTGACCTG TACCTGCGTG ACGTGGACAA TCTCGCCGCG GAACTGTCGA TGCAGCAAGC CAGCGACGCT CTGCGTGCCA GCGTGGGTGA CAGCGCCGAA CCCTATCGGG CAGAACTCAA ACGCCTGCGC GAGCGCTTGC GCGCGACGCG CAACTGGGCC AATGCCTCAC TGAGCGAAAC CCTGCCTGCG CCGGAAGCGG TGCTGCGAGA CAACCGTGAA CTGCTCGACC CGCTGCTGCT GTGCTTCCAG TCGCTGCACG AATGCGGCAT GGGTGTCATC GCCGACGGCC CGCTTCTGGA TTGCCTGCGT CGTGCGGTCA CATTCGGCCT GTTCCTGGTG CGTCTGGATG TTCGCCAGGA TTCCAGCCGT CACTGCGCAG CGATGACCGA AATCACCGAT TATCTGGGGC TGGGTCGCTA CGAAGAGTGG GACGAGCAGA CCCGCATCGA TTTTCTGCTG CGTGAATTGA ATAACCGCAG GCCGCTGCTG CCGAGCTACT TCAAACCGGC CGCCGATACC GCAGAGGTTC TCGCAACCTG CCGCGAGGTG GCGGCCGCCC CGGCGGCGTC GCTGGGGTCC TATGTCATCT CGATGGCCGG CTCGGCTTCG GATGTGCTGG CCGTGCAACT GCTGCTCAAG GAATCCGGGC TGCAGCGGCC CATGCGTGTG GTGCCGTTGT TCGAGACCCT GGCCGACCTG GATAACGCCG GGCCGGTGAT CGAGACGCTG CTCGGGCTGC CGGGCTATCG CTCGCGTCTG CACGGCCCGC AAGAGGTGAT GATCGGCTAT TCCGACTCGG CCAAGGATGC CGGCACCACT GCGGCGGCCT GGGCGCAGTA CCGCGCCCAG GAAAGGCTGG TGGAGATCTG CCGCGAGCAG CAGGTCGAAT TGCTGCTGTT CCACGGCCGC GGCGGTACAG TCGGTCGTGG CGGCGGCCCG GCGCACGCGG CGATCCTCTC GCAGCCGCCG GGTTCTGTGG CCGGGCGTTT CCGGACCACC GAGCAAGGGG AAATGATTCG TTTCAAATTC GGTCTGCCGG ACATCGCCGA GCAGAACCTC AATCTGTATC TGGCTGCCGT GCTGGAAGCG ACCCTGTTGC CACCGCCACC TCCGCAGCCA GCGTGGCGGA CGATGATGGA CCAGATGGCC GACGACGGGG TCAGTGCCTA CCGAGCGGTG GTGCGCGAGA ATCCCGAATT TGTCGAGTAT TTCCGCCAGG CGACACCCGA GCAGGAGCTG GGGCGCTTGC CACTCGGCAG TCGTCCGGCC AAGCGCCGCG AGGGCGGTGT AGAAAGTCTT CGTGCCATTC CGTGGATCTT CGCCTGGACG CAGACGCGTC TGATGCTGCC CGCCTGGCTG GGTTGGGAGG CTGCGCTGAG CAAGGCGCTG GAGCGCGGCG AAGGCGAGGT GCTGGCGCAG ATGCGTGAGC AGTGGCCGTT CTTCAGAACG CGCATCGACA TGCTGGAAAT GGTCCTTGCC AAAGCCGATG CGGACATCGC CCGACTCTAC GACGAACGTC TGGTCAGTGC TGAGCTGCAA CATTTGGGTG CACATTTACG CGACCTATTG TCGCAGGCGT GCAATGTGGT TCTGGGGCTG ACCGGGCAGA CGCAACTGCT GGCTCACAGC CCTGAAACGC TGGAATTCAT CAGTCTGCGC AACACCTACC TTGACCCGTT GCATTTGCTT CAGGCGGAGC TGCTGTCGCG CTCGCGTAAT CGTGAAGCCA GTCTGGACAG TCCTCTGGAA CTGGCGCTGC TGGTGTCCGT AGCGGGGATT GCTGCCGGTC TGCGTAACAC GGGCTGA
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Protein sequence | MADIDARLRE DVHLLGELLG NTIREQRGAE FLDKIERIRK GAKAGRRGSA EGAEQLSSSV DGLGDDELLP VARAFNQFLN LANIAEQYQL MHRRDDKQPL PFESRVLPEL LDRLKAEGHS PDALARQLSK LEIDLVLTAH PTEVARRTLI QKYDAIAAQL AALDHRDLNS IERTQITSRL QRLIAEAWHT EEIRRIRPTP VDEAKWGFAV IEHSLWHAIP NYLRKADHAL HAATGLHLPL EAAPIRFASW MGGDRDGNPN VTAAVTREVL LLARWMAADL YLRDVDNLAA ELSMQQASDA LRASVGDSAE PYRAELKRLR ERLRATRNWA NASLSETLPA PEAVLRDNRE LLDPLLLCFQ SLHECGMGVI ADGPLLDCLR RAVTFGLFLV RLDVRQDSSR HCAAMTEITD YLGLGRYEEW DEQTRIDFLL RELNNRRPLL PSYFKPAADT AEVLATCREV AAAPAASLGS YVISMAGSAS DVLAVQLLLK ESGLQRPMRV VPLFETLADL DNAGPVIETL LGLPGYRSRL HGPQEVMIGY SDSAKDAGTT AAAWAQYRAQ ERLVEICREQ QVELLLFHGR GGTVGRGGGP AHAAILSQPP GSVAGRFRTT EQGEMIRFKF GLPDIAEQNL NLYLAAVLEA TLLPPPPPQP AWRTMMDQMA DDGVSAYRAV VRENPEFVEY FRQATPEQEL GRLPLGSRPA KRREGGVESL RAIPWIFAWT QTRLMLPAWL GWEAALSKAL ERGEGEVLAQ MREQWPFFRT RIDMLEMVLA KADADIARLY DERLVSAELQ HLGAHLRDLL SQACNVVLGL TGQTQLLAHS PETLEFISLR NTYLDPLHLL QAELLSRSRN REASLDSPLE LALLVSVAGI AAGLRNTG
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