| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1309 |
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| Symbol | |
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| ID | 3366804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1486002 |
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| End bp | 1487006 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651648 |
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| Product | GGDEF |
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| Protein accession | YP_234398 |
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| Protein GI | 66044557 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00365402 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGACC TGCAAACGGA TGAGCTCAAG ACACCGGATG AAAACAGCGC AATGGTGCTT
CTGGTGGATG ATCAGGCCAT GATTGGTGAA GCCGTACGGC GCGGCCTGGC CGGCCATGAG
TCTATCGACT TTCATTTTTG TGCCGACCCG CATCAGGCGA TCGCCCAGGC CGTGCAGATC
AAGCCGACGG TGATTCTTCA GGACCTGGTG ATGCCGGGCC TCGATGGGCT GACGCTGGTT
CGCGAGTACC GCAGCAACCC GCTGACCCGC GATATCCCGA TCATCGTGCT GTCCACCAAG
GAAGACCCGC TGATAAAGAG CGCGGCGTTC ACGGCCGGGG CCAACGACTA TCTGGTCAAG
CTGCCGGACA ACATCGAGCT GGTGGCGCGC ATTCGCTATC ACTCGCGCTC GTACATGACC
CTGCTGCAGC GCGATGAAGC CTACCGCGCG CTGCGGGTCA GCCAGCAGCA ACTGCTCGAC
ACCAATCTGG TGCTGCAGCG CCTGATGAAT TCCGATGGCC TCACGGGGCT GTCGAATCGC
CGCCATTTCG ACGAGTATCT GGAACTGGAG TGGCGCCGGG CAATTCGCGA GCAGTCCCAG
TTGTCGTTGC TGATGATCGA TGTCGACTAC TTCAAGCCCT ACAACGATAA CTTCGGGCAT
CTGGAGGGCG ACGAGGCCCT GCGTCAGGTC GCCAAGGCCA TTCGTAACAG TTGCAGTCGC
CCGTCGGACT TGCCGGCTCG CTACGGCGGC GAGGAGTTCG CCATGGTCCT GCCCAACACC
TCACCGGGCG GGGCGCGTCT GCTGGCTGAA AAACTGCGCC AGAGCGTTTC AGGCATGAAT
ATTCCGCACA TTGCGCCAGC GCCGGGCTCC AGCCTGACCG TGAGTATCGG TGTGGCGACC
ATGACGCCAC AGCTCGGAAT GCCCAGCCGT CAGCTGATTC TGGATGCCGA CAAGGGGCTT
TATCAGGCCA AGAACAACGG GCGCAATCAG GTCGCAGCGG GCTGA
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| Protein sequence | MNDLQTDELK TPDENSAMVL LVDDQAMIGE AVRRGLAGHE SIDFHFCADP HQAIAQAVQI
KPTVILQDLV MPGLDGLTLV REYRSNPLTR DIPIIVLSTK EDPLIKSAAF TAGANDYLVK
LPDNIELVAR IRYHSRSYMT LLQRDEAYRA LRVSQQQLLD TNLVLQRLMN SDGLTGLSNR
RHFDEYLELE WRRAIREQSQ LSLLMIDVDY FKPYNDNFGH LEGDEALRQV AKAIRNSCSR
PSDLPARYGG EEFAMVLPNT SPGGARLLAE KLRQSVSGMN IPHIAPAPGS SLTVSIGVAT
MTPQLGMPSR QLILDADKGL YQAKNNGRNQ VAAG
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