Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1300 |
Symbol | |
ID | 3366795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1468991 |
End bp | 1471078 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637651639 |
Product | PAS |
Protein accession | YP_234389 |
Protein GI | 66044548 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.233563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATATCGC CCACTGGTTT CCCGACCGCC AACGGCAAGG CCGCCGGGAT TATCCGATCC AGGGACTGGA GCCAGACTTC ACTCGGACCG ATCGAGCACT GGCCGGTATC GCTGAAAAAC ACCCTGAATC TGATCCTCAA TTCCCCGGAG TCCATGTACC TGCTCTGGGG GCCGGATCTG GTGTTTTTCC ACAATGACGC CTATACGCCG ATTCTCGGCC CGCGCAAGGA CAACGCTATC GGCGCACTCA TTCCGGATCT GTGGGCTGAC GTCTGGGATC AGGTCGCGCC GCTGGTGATC GATGCGTTTG CCGGCAAGCC CTGCCGCTAC ACGGATATGC CGCTGACCAT GGCACGCTAC GGCGAGGTCG AACAGACATG GTGGTCATTT TCGTTTTCAC CGGTAATCGA CGAATACGGC GTGGTTGTCG GCATGTTCTG CATCACCAAC GAAACCACCG CGCATGTCCT CAACCAGCAG GCGCTGCAGG ATAGCGAACG CAAACGCCTG AAACTGATCG ATGATCTGGT CAGCCTGGAA CGACAGCAGA CCGCCAGGCT GGAGCAACGC ACGCTGGAGC TGGACACGTT TTGGGAGATA TCTCCGGACC CGCTGGCGAT ACTCGATTTC AACGGTATCT TTCTGCGGGT AAACCCGGCC TGGACAGCGC TGCTGGGCCA CCCGGAACAC GAGCTGCTGG GCACCTCCAT CATGACCCTG CTGCATCCGG ATGATGTCAG CGGCACCCAG AATGCTCTGA AACACACCAT CAACCATGTG CTGCCGCTGT TTGAAAATCG TTATCAGCAC GTCGACGGCA GCTATCACTG GTTCGGCTGG ACCGCGGCAC CCGGCAATGG AATCATTTTT GCGCTGGGCA AACACCTGAC CCACGAAAAG GACCGCATCA AGGCACTGCG TATCGCCGAA GAGGCCTTGA TTCAATCGCA GAAAATGGAA GCGGTCGGGC AATTGACCGG CGGTCTGGCT CATGACTTCA ACAACCTGCT GATGGGCGTG ACCGGCAACA TGGAGCTGCT CCTGTCGAGG ATCAGACAGG AACGCTTCAC AGAGCTGGAC CGCTACATCA ACGCCGCACT GGAAGGTTCG CGACGCGCGG CATCCCTGAC ACATCGACTG CTGGCATTTT CGCGCCGTCA GACACTGGCG CCCAAGGCTA CTGATATCGA CCTGCTGGTC GTGGACATGG ACGAGCTGAT CCGGCGCACC GTAGGTCCGG CCATCGATAT GCAGGTCAAT GCCTCACGCG GACTGTGGGC GACCCTGGTT GACCCGCATC AACTGGAAAA TTCACTGCTC AACCTGTGCA TCAACGCCAA GGACGCCATG CCCGATGGCG GAAAGCTGCT GATCCAGACG GGCAACCGTC ACCTGACTGC AGTCACGGCG ACCCGGTATC AGTTGCCTGC AGGCCGCTAT GTGGAACTGT CCGTCAGCGA CTCCGGCACG GGCATGAGCA ACGACGTCAT GGCGAGGGCC TTCGACCCGT TCTTCACCAC CAAACCGACA GGCATGGGCA CCGGACTGGG GTTGTCGATG ATTTACGGTT TTGCACGGCA GTCAGGTGGC GGCGTCTACA TCACGTCAAA GGTTGGCGAG GGTTCGAAAG TCAGCATTCT GCTGCCGATG CACGAAGGCG AAGCTGAAAC AGTGGCCTTC GATGACAGCC CGCTGCAAGT GCCCGCCTCC AGCACCGGCG ACGAAACCAT TCTGGTGGTC GATGACGAGC CCGCCGTGCG CTTGCTCATT ACGGAGTTGC TAGAGGACCT TGGCTATATC GTTTTGCAGG CTGAACGAGG CGCCGATGCG CTGACCATTC TGCAGTCCAA GGCGGCCATC GACCTGCTGA TCACCGACGT CGGTCTGCCG GGCGGCATGA ACGGTCGTCA GGTCGCAGAC GCGGCGCGGG ATGTCCGGCC CGACCTGAAA ATCCTGTTTG TGACCGGTTA TGCTGAAAAC GCCGCGTTGG CGCATGACAC GCTGGAGCCG GGCATGCACG TGCTGCCCAA GCCCTTTGCG ATTGCCGAAC TGATCGGCCG CGTCACCGAG CTGCTGGAAG GCGAGTAA
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Protein sequence | MISPTGFPTA NGKAAGIIRS RDWSQTSLGP IEHWPVSLKN TLNLILNSPE SMYLLWGPDL VFFHNDAYTP ILGPRKDNAI GALIPDLWAD VWDQVAPLVI DAFAGKPCRY TDMPLTMARY GEVEQTWWSF SFSPVIDEYG VVVGMFCITN ETTAHVLNQQ ALQDSERKRL KLIDDLVSLE RQQTARLEQR TLELDTFWEI SPDPLAILDF NGIFLRVNPA WTALLGHPEH ELLGTSIMTL LHPDDVSGTQ NALKHTINHV LPLFENRYQH VDGSYHWFGW TAAPGNGIIF ALGKHLTHEK DRIKALRIAE EALIQSQKME AVGQLTGGLA HDFNNLLMGV TGNMELLLSR IRQERFTELD RYINAALEGS RRAASLTHRL LAFSRRQTLA PKATDIDLLV VDMDELIRRT VGPAIDMQVN ASRGLWATLV DPHQLENSLL NLCINAKDAM PDGGKLLIQT GNRHLTAVTA TRYQLPAGRY VELSVSDSGT GMSNDVMARA FDPFFTTKPT GMGTGLGLSM IYGFARQSGG GVYITSKVGE GSKVSILLPM HEGEAETVAF DDSPLQVPAS STGDETILVV DDEPAVRLLI TELLEDLGYI VLQAERGADA LTILQSKAAI DLLITDVGLP GGMNGRQVAD AARDVRPDLK ILFVTGYAEN AALAHDTLEP GMHVLPKPFA IAELIGRVTE LLEGE
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